myRT

myRT report for GCA_003402095.1_ASM340209v1

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Seq: QDDS01000033.1 Klebsiella michiganensis strain IS1015-72 NODE_33_length_75312_cov_26.7907_ID_9008, whole genome shotgun sequence (75312 bp)
Overview 1 RT 1: 65607-69808 bp Neighborhood of RT #1 [65607, 69825] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 65607-66278 bp Feature: domain Description: Plasmid_stab_B Location: 65622-65829 bp Feature: domain Description: Plasmid_stab_B Location: 65622-65829 bp Feature: domain Description: Plasmid_stab_B Location: 65934-66141 bp Feature: domain Description: Plasmid_stab_B Location: 65934-661 41 bp Feature: gene Location: 66281-67252 bp Feature: domain Description: StbA Location: 66284-67229 bp Feature: domain Description: StbA Location: 66284-67229 bp Feature: gene Location: 67501-68988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67906-68596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67906-68596 bp Feature: gene Location: 69039-69272 bp Feature: gene Location: 69142-69825 bp Feature: domain Description: PRK10276 Location: 69442-69808 bp Feature: domain Description: PRK1 0276 Location: 69442-69808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: QDDS01000049.1 Klebsiella michiganensis strain IS1015-72 NODE_49_length_11954_cov_31.1568_ID_9040, whole genome shotgun sequence (11954 bp)
Overview 1 RT 1: 8469-10808 bp Neighborhood of RT #1 [8469, 11728] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 8469-8684 bp Feature: gene Location: 8775-9056 bp Feature: domain Description: HTH_XRE Location: 8790-8955 bp Feature: domain Description: HTH_XRE Location: 8790-8955 bp Feature: gene Location: 9049-10149 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9190-9742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9190-9742 bp Feature: gene Location: 10226-11728 bp Feature: domain Description: PRK13889 Location: 10229-10808 bp Feature: domain Description: PRK13889 Location: 102 2 9-10808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), HTH_XRE (smart00530), RVT-Retrons