myRT

myRT report for GCA_003402105.1_ASM340210v1

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Seq: QDDZ01000089.1 Klebsiella pneumoniae strain H1 NODE_100_length_1892_cov_1370.11, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QDDZ01000032.1 Klebsiella pneumoniae strain H1 NODE_32_length_42159_cov_227.813, whole genome shotgun sequence (42159 bp)
Overview 1 RT 1: 633-7486 bp Neighborhood of RT #1 [633, 7503] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 633-1298 bp Feature: domain Description: INT_P4_C Location: 738-1296 bp Feature: domain Description: INT_P4_C Location: 738-12 96 bp Feature: gene Location: 1559-1999 bp Feature: domain Description: Integrase_1 Location: 1565-1781 bp Feature: domain Description: Integrase_1 Location: 1565-1781 bp Feature: gene Location: 2056-4134 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2464-2908 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 464-2 908 bp Feature: gene Location: 4134-6743 bp Feature: domain Description: FimD Location: 4191-6732 bp Feature: domain Description: FimD Location: 4191-6732 bp Feature: gene Location: 6775-7503 bp Feature: domain Description: FimC Location: 6823-7486 bp Feature: domain Description: FimC Location: 682 3-7486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)