myRT

myRT report for GCA_003402125.1_ASM340212v1

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Seq: QDDX01000013.1 Klebsiella pneumoniae strain H3 NODE_13_length_151688_cov_211.192, whole genome shotgun sequence (151688 bp)
Overview 1 RT 1: 31974-38827 bp Neighborhood of RT #1 [31974, 38844] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31974-32639 bp Feature: domain Description: INT_P4_C Location: 32079-32637 bp Feature: domain Description: INT_P4_C Location: 32079-32637 bp Feature: gene Location: 32900-33340 bp Feature: domain Description: Integrase_1 Location: 32906-33122 bp Feature: domain Description: Integrase_1 Location: 32906-331 22 bp Feature: gene Location: 33397-35475 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-34249 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-34249 bp Feature: gene Location: 35475-38084 bp Feature: domain Description: FimD Location: 35532-38073 bp Feature: domain Description: FimD Location: 35532-38073 bp Feature: gene Location: 38116-38844 bp Feature: domain Description: FimC Location: 38164-38827 bp Feature: domain Description: FimC Location: 381 64-38827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QDDX01000074.1 Klebsiella pneumoniae strain H3 NODE_74_length_3946_cov_1.03741, whole genome shotgun sequence (3906 bp)
Overview 1 RT 1: 321-3617 bp Neighborhood of RT #1 [321, 3904] Tnp_22_trimer Transposase_22 Transposase_22 Tnp_22_dsRBD L1-EN RVT-UNC Feature: gene Location: 321-872 bp Feature: domain Description: Tnp_22_trimer Location: 648-774 bp Feature: domain Description: Tnp_2 2 _trimer Location: 648-774 bp Feature: domain Description: Transposase_22 Location: 783-864 bp Feature: domain Description: Transposase_2 2 Location: 783-864 bp Feature: gene Location: 980-1312 bp Feature: domain Description: Transposase_22 Location: 983-1058 bp Feature: domain Description: Transposase_2 2 Location: 983-1058 bp Feature: domain Description: Tnp_22_dsRBD Location: 1061-1253 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 1061-12 53 bp Feature: gene Location: 1376-3904 bp Feature: domain Description: L1-EN Location: 1406-2087 bp Feature: domain Description: L1-EN Location: 1406-2 087 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2960-3617 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 960-3617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: QDDX01000085.1 Klebsiella pneumoniae strain H3 NODE_89_length_1893_cov_773.846, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII