myRT

myRT report for GCA_003402555.1_Sfl_assembly01

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Seq: BGPS01000003.1 Pectobacterium carotovorum subsp. carotovorum RMIT1 DNA, DMG1700369_cg_3, whole genome shotgun sequence (210514 bp)
Overview 1 RT 1: 34189-38893 bp Neighborhood of RT #1 [34189, 38907] RVT-Retrons DUF3800 MDR_like_2 Feature: gene Location: 34189-34392 bp Feature: gene Location: 34493-34750 bp Feature: gene Location: 34951-36675 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35089-35713 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35089-3571 3 bp Feature: gene Location: 37044-37814 bp Feature: domain Description: DUF3800 Location: 37059-37584 bp Feature: domain Description: DUF3800 Location: 37059-37584 bp Feature: gene Location: 38476-38907 bp Feature: domain Description: MDR_like_2 Location: 38482-38893 bp Feature: domain Description: MDR_like_2 Location: 38482-38893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF3800 (pfam12686), MDR_like_2 (cd05289)

Seq: BGPS01000041.1 Pectobacterium carotovorum subsp. carotovorum RMIT1 DNA, DMG1700369_cg_41, whole genome shotgun sequence (5732 bp)
Overview 1 RT 1: 3-2423 bp Neighborhood of RT #1 [3, 2423] CspC RVT-Retrons Feature: gene Location: 3-197 bp Feature: domain Description: CspC Location: 6-195 bp Feature: domain Description: CspC Location: 6-195 bp Feature: gene Location: 201-1343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 345-900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 345-900 bp Feature: gene Location: 1366-1548 bp Feature: gene Location: 2142-2423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)