myRT

myRT report for GCA_003402595.1_ASM340259v1

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Seq: BGZL01000014.1 Streptomyces spongiicola 531S DNA, Contig14, whole genome shotgun sequence (159405 bp)
Overview 1 RT 1: 89497-95600 bp Neighborhood of RT #1 [89497, 95600] DUF2397 PIN_VapC4-5_FitB-like RVT-GII GIIM Feature: gene Location: 89497-91068 bp Feature: domain Description: DUF2397 Location: 89620-91045 bp Feature: domain Description: DUF2397 Location: 89620-91 045 bp Feature: gene Location: 92477-92869 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 92525-92789 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 92525-92789 bp Feature: gene Location: 93068-94366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93341-93980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93341 -93980 bp Feature: domain Description: GIIM Note: maturase Location: 94064-94286 bp Feature: domain Description: GIIM Note: maturase Location: 94064-94286 bp Feature: gene Location: 94805-94948 bp Feature: gene Location: 95133-95600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2397 (pfam09660), PIN_VapC4-5_FitB-like (cd18754), RVT-GII, GIIM (pfam08388)

Seq: BGZL01000042.1 Streptomyces spongiicola 531S DNA, Contig42, whole genome shotgun sequence (7435 bp)
Overview 1 RT 1: 1-4125 bp Neighborhood of RT #1 [1, 4125] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1-255 bp Feature: gene Location: 1237-3111 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1447-2053 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1447-2 053 bp Feature: domain Description: Cas1_I-II-III Location: 2119-3076 bp Feature: domain Description: Cas1_I-II-III Location: 2 119-3076 bp Feature: gene Location: 3122-3406 bp Feature: domain Description: Cas2_I_II_III Location: 3137-3368 bp Feature: domain Description: Cas2 _I_II_III Location: 3137-3368 bp Feature: gene Location: 3622-4125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: BGZL01000059.1 Streptomyces spongiicola 531S DNA, Contig59, whole genome shotgun sequence (1963 bp)
Overview 1 RT 1: 273-1724 bp Neighborhood of RT #1 [273, 1816] GIIM RVT-GII Feature: gene Location: 273-572 bp Feature: gene Location: 677-916 bp Feature: domain Description: GIIM Note: maturase Location: 680-824 bp Feature: domain Description: GIIM Note: maturase Location: 680-824 bp Feature: gene Location: 983-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII