myRT

myRT report for GCA_003402785.1_ASM340278v1

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Seq: PXKE01001067.1 Escherichia coli strain CRE50 NODE_1067_length_225_cov_1.61765, whole genome shotgun sequence (225 bp)
Overview 1 RT 1: 3-225 bp Neighborhood of RT #1 [3, 224] RVT-GII Feature: gene Location: 3-224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PXKE01001238.1 Escherichia coli strain CRE50 NODE_1238_length_218_cov_1.1227, whole genome shotgun sequence (218 bp)
Overview 1 RT 1: 2-218 bp Neighborhood of RT #1 [2, 217] RVT-GII Feature: gene Location: 2-217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-2 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PXKE01001261.1 Escherichia coli strain CRE50 NODE_1261_length_217_cov_1.1358, whole genome shotgun sequence (217 bp)
Overview 1 RT 1: 2-215 bp Neighborhood of RT #1 [2, 214] RVT-GII GIIM Feature: gene Location: 2-214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-56 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-56 bp Feature: domain Description: GIIM Note: maturase Location: 107-215 bp Feature: domain Description: GIIM Note: maturase Location: 107-215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PXKE01000012.1 Escherichia coli strain CRE50 NODE_12_length_100057_cov_69.8396, whole genome shotgun sequence (100057 bp)
Overview 1 RT 1: 64884-70915 bp Neighborhood of RT #1 [64884, 70915] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 64884-65804 bp Feature: domain Description: AbiEii Location: 64926-65667 bp Feature: domain Description: AbiEii Location: 64 926-65667 bp Feature: gene Location: 65791-66594 bp Feature: domain Description: AbiEi_3_N Location: 65824-66085 bp Feature: domain Description: AbiEi_3_N Location: 65824 -66085 bp Feature: domain Description: AbiEi_3 Location: 66097-66553 bp Feature: domain Description: AbiEi_3 Location: 66097-66553 bp Feature: gene Location: 66889-70098 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67417-67906 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 674 17-67906 bp Feature: domain Description: nitrilase Location: 69412-70009 bp Feature: domain Description: nitrilase Location: 694 12-70009 bp Feature: gene Location: 70259-70399 bp Feature: domain Description: Phage_ASH Location: 70286-70379 bp Feature: domain Description: Phage_ASH Location: 70286-70379 bp Feature: gene Location: 70445-70915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: PXKE01000037.1 Escherichia coli strain CRE50 NODE_37_length_46307_cov_68.6991, whole genome shotgun sequence (46307 bp)
Overview 1 RT 1: 23663-27954 bp Neighborhood of RT #1 [23663, 27954] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 23663-24925 bp Feature: domain Description: YesM Location: 24176-24917 bp Feature: domain Description: YesM Location: 24176-24917 bp Feature: gene Location: 24955-25125 bp Feature: gene Location: 25475-25996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25481-25763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 481-25 763 bp Feature: domain Description: GIIM Note: maturase Location: 25811-25991 bp Feature: domain Description: GIIM Note: maturase Location: 25 811-25 991 bp Feature: gene Location: 26024-26563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26354-26432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2635 4-26432 bp Feature: gene Location: 26594-26791 bp Feature: gene Location: 27049-27954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: PXKE01000064.1 Escherichia coli strain CRE50 NODE_64_length_17271_cov_72.284, whole genome shotgun sequence (17271 bp)
Overview 1 RT 1: 5129-9447 bp Neighborhood of RT #1 [5129, 9503] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 5129-5953 bp Feature: gene Location: 6080-6370 bp Feature: domain Description: PHA02517 Location: 6086-6305 bp Feature: domain Description: PHA02517 Location: 6 086 -6 305 bp Feature: gene Location: 6962-8485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7235-7967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7235-796 7 bp Feature: domain Description: GIIM Note: maturase Location: 8042-8240 bp Feature: domain Description: GIIM Note: maturase Location: 8042-8240 bp Feature: gene Location: 8662-9048 bp Feature: domain Description: PHA02517 Location: 8665-9046 bp Feature: domain Description: PHA02517 Location: 86 6 5-9046 bp Feature: gene Location: 9153-9503 bp Feature: domain Description: InsE Location: 9162-9447 bp Feature: domain Description: InsE Location: 916 2-9447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: PXKE01000800.1 Escherichia coli strain CRE50 NODE_800_length_241_cov_1.20968, whole genome shotgun sequence (241 bp)
Overview 1 RT 1: 3-237 bp Neighborhood of RT #1 [3, 239] RVT-GII Feature: gene Location: 3-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII