myRT

myRT report for GCA_003403175.1_ASM340317v1

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Seq: QUWM01000029.1 Klebsiella pneumoniae strain R1700 1700_contig00029, whole genome shotgun sequence (75843 bp)
Overview 1 RT 1: 23674-30542 bp Neighborhood of RT #1 [23674, 30544] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 23674-24402 bp Feature: domain Description: FimC Location: 23707-24385 bp Feature: domain Description: FimC Location: 23707-24385 bp Feature: gene Location: 24434-27043 bp Feature: domain Description: FimD Location: 24491-27032 bp Feature: domain Description: FimD Location: 24491 -27032 bp Feature: gene Location: 27043-29121 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 27451-27895 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 27451 -27895 bp Feature: gene Location: 29178-29618 bp Feature: domain Description: Integrase_1 Location: 29184-29400 bp Feature: domain Description: Integrase_1 Location: 291 84-29400 bp Feature: gene Location: 29879-30544 bp Feature: domain Description: INT_P4_C Location: 29984-30542 bp Feature: domain Description: INT_P4_C Location: 29984-30542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: QUWM01000034.1 Klebsiella pneumoniae strain R1700 1700_contig00034, whole genome shotgun sequence (58298 bp)
Overview 1 RT 1: 48879-52149 bp Neighborhood of RT #1 [48879, 52163] RVT-GII PRK10276 Feature: gene Location: 48879-49094 bp Feature: gene Location: 49361-49591 bp Feature: gene Location: 49825-51336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50230-50944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 30-50944 bp Feature: gene Location: 51387-51620 bp Feature: gene Location: 51738-52163 bp Feature: domain Description: PRK10276 Location: 51741-52149 bp Feature: domain Description: PRK102 76 Location: 51741-52 149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)