myRT

myRT report for GCA_003408655.1_ASM340865v1

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Seq: NRDJ01000002.1 Vibrio splendidus strain OU02 Scaffold2, whole genome shotgun sequence (2022849 bp)
Overview 1 RT 1: 24210-29786 bp Neighborhood of RT #1 [24210, 30178] COG3981 RVT-UG15 HEPN_LA2681 KAP_NTPase Feature: gene Location: 24210-24572 bp Feature: gene Location: 24709-25077 bp Feature: domain Description: COG3981 Location: 24718-25063 bp Feature: domain Description: COG3981 Location: 2471 8-25063 bp Feature: gene Location: 25461-27068 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 25872-26274 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 25872-26274 bp Feature: gene Location: 27190-28665 bp Feature: domain Description: HEPN_LA2681 Location: 27985-28600 bp Feature: domain Description: HEPN_LA2681 Location: 27985-28600 bp Feature: gene Location: 28658-30178 bp Feature: domain Description: KAP_NTPase Location: 28736-29786 bp Feature: domain Description: KAP_NTPase Location: 28736-29786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3981 (Predicted acetyltransferase ), RVT-UG15, HEPN_LA2681 (pfam18733), KAP_NTPase (pfam07693)

Seq: NRDJ01000003.1 Vibrio splendidus strain OU02 Scaffold3, whole genome shotgun sequence (1562308 bp)
Overview 1 RT 1: 330730-335500 bp Neighborhood of RT #1 [330730, 335529] AlpA PRK08719 RVT_N RVT-GII GIIM PRK05718 KdgK Feature: gene Location: 330730-330915 bp Feature: domain Description: AlpA Location: 330733-330904 bp Feature: domain Description: AlpA Location: 330733-330904 bp Feature: gene Location: 330998-331444 bp Feature: domain Description: PRK08719 Location: 331001-331430 bp Feature: domain Description: PRK08719 Location: 331001-331430 bp Feature: gene Location: 331673-333172 bp Feature: domain Description: RVT_N Location: 331721-331964 bp Feature: domain Description: RVT_N Location: 33172 1-331964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332009-332636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 009-332 636 bp Feature: domain Description: GIIM Note: maturase Location: 332696-332921 bp Feature: domain Description: GIIM Note: maturase Location: 332 696-332 92 1 bp Feature: gene Location: 333960-334583 bp Feature: domain Description: PRK05718 Location: 333966-334575 bp Feature: domain Description: PRK05718 Location: 333966-334575 bp Feature: gene Location: 334594-335529 bp Feature: domain Description: KdgK Location: 334609-335500 bp Feature: domain Description: KdgK Location: 334609-335500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), PRK08719 (ribonuclease H; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK05718 (keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional), KdgK (cd01166)