myRT

myRT report for GCA_003411335.1_ASM341133v1

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Seq: QVCC01000023.1 Pseudomonas aeruginosa strain PABL067 NODE_23_length_79960_cov_100.409, whole genome shotgun sequence (79960 bp)
Overview 1 RT 1: 79-8540 bp Neighborhood of RT #1 [79, 8542] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 79-1764 bp Feature: RT Description: RVT_N Location: 136-376 bp Feature: RT Description: RVT_N Location: 1 36-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1 060 bp Feature: domain Description: GIIM Note: maturase Location: 1114-1345 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 4-1 345 bp Feature: domain Description: HNH Note: nucleases Location: 1597-1735 bp Feature: domain Description: HNH Note: nucleases Location: 1 597-1 735 bp Feature: gene Location: 2845-6582 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 2953-3610 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 2953-361 0 bp Feature: domain Description: PRK09776 Location: 3823-4294 bp Feature: domain Description: PRK09776 Location: 3823-4294 bp Feature: domain Description: PAS Location: 4339-4876 bp Feature: domain Description: PAS Location: 4339-4876 bp Feature: domain Description: PRK10060 Location: 4885-6532 bp Feature: domain Description: PRK1 0060 Location: 4885-6532 bp Feature: gene Location: 6689-8542 bp Feature: domain Description: PRK05658 Location: 6701-8540 bp Feature: domain Description: PRK05658 Location: 6701 -8540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: QVCC01000347.1 Pseudomonas aeruginosa strain PABL067 NODE_348_length_341_cov_1.3007, whole genome shotgun sequence (341 bp)
Overview 1 RT 1: 29-338 bp Neighborhood of RT #1 [29, 340] RVT-GII Feature: gene Location: 29-340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188-338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII