myRT

myRT report for GCA_003411415.1_ASM341141v1

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Seq: QVCD01000130.1 Pseudomonas aeruginosa strain PABL066 NODE_130_length_13311_cov_30.4116, whole genome shotgun sequence (13269 bp)
Overview 1 RT 1: 128-4699 bp Neighborhood of RT #1 [128, 4911] RVT-UG5 nitrilase COG4127 TIGR02646 Feature: gene Location: 128-2608 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 131-560 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 31 -560 bp Feature: domain Description: nitrilase Location: 1922-2504 bp Feature: domain Description: nitrilase Location: 1 922-2504 bp Feature: gene Location: 2978-3970 bp Feature: domain Description: COG4127 Location: 2984-3959 bp Feature: domain Description: COG41 27 Location: 2984-3959 bp Feature: gene Location: 4033-4911 bp Feature: domain Description: TIGR02646 Location: 4246-4699 bp Feature: domain Description: TIGR02646 Location: 4246-4699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), TIGR02646 (TIGR02646 family protein)

Seq: QVCD01000216.1 Pseudomonas aeruginosa strain PABL066 NODE_217_length_2421_cov_69.9594, whole genome shotgun sequence (2421 bp)
Overview 1 RT 1: 86-2418 bp Neighborhood of RT #1 [86, 2418] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 86-1804 bp Feature: domain Description: RVT_N Location: 143-380 bp Feature: domain Description: RVT_N Location: 143-380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1082 bp Feature: domain Description: GIIM Note: maturase Location: 1136-1367 bp Feature: domain Description: GIIM Note: maturase Location: 1136-1367 bp Feature: domain Description: HNHc Note: nucleases Location: 1601-1757 bp Feature: domain Description: HNHc Note: nucleases Location: 1601-1757 bp Feature: gene Location: 2074-2202 bp Feature: gene Location: 2233-2418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)