myRT

myRT report for GCA_003412355.1_ASM341235v1

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Seq: QVBA01000013.1 Pseudomonas aeruginosa strain PABL096 NODE_13_length_129490_cov_64.6844, whole genome shotgun sequence (129490 bp)
Overview 1 RT 1: 1-5389 bp Neighborhood of RT #1 [1, 5586] RVT-GII GIIM CHD CHD Feature: gene Location: 1-351 bp Feature: gene Location: 779-2047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1 649 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1949 bp Feature: domain Description: GIIM Note: maturase Location: 1 727-1 949 bp Feature: gene Location: 2779-2958 bp Feature: gene Location: 4042-5586 bp Feature: domain Description: CHD Location: 4258-4672 bp Feature: domain Description: CHD Location: 4258-4672 bp Feature: domain Description: CHD Location: 4900-5389 bp Feature: domain Description: CHD Location: 4900-5389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388)

Seq: QVBA01000003.1 Pseudomonas aeruginosa strain PABL096 NODE_3_length_374011_cov_64.7035, whole genome shotgun sequence (374011 bp)
Overview 1 RT 1: 277230-280486 bp Neighborhood of RT #1 [277230, 280503] DUF1643 ASCH_yqfb_like ASCH_yqfb_like RVT-DGRs Avd_like DUF1566 Feature: gene Location: 277230-277718 bp Feature: domain Description: DUF1643 Location: 277266-277665 bp Feature: domain Description: DUF1643 Location: 2 772 66-2 77665 bp Feature: gene Location: 277715-278392 bp Feature: domain Description: ASCH_yqfb_like Location: 277733-277808 bp Feature: domain Description: ASCH_yqfb_like Location: 2 77733-2 77808 bp Feature: domain Description: ASCH_yqfb_like Location: 278150-278225 bp Feature: domain Description: ASCH_yqfb_like Location: 2 78150-2 782 2 5 bp Feature: gene Location: 278247-279128 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 278340-278904 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 78340-2 78904 bp Feature: gene Location: 279489-279845 bp Feature: domain Description: Avd_like Location: 279516-279822 bp Feature: domain Description: Avd_like Location: 2 79516-2 7982 2 bp Feature: gene Location: 279898-280503 bp Feature: domain Description: DUF1566 Location: 280120-280486 bp Feature: domain Description: DUF1566 Location: 2 8012 0-2 80486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1643 (pfam07799), ASCH_yqfb_like (cd06552), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)