myRT

myRT report for GCA_003412695.1_ASM341269v1

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Seq: QPBW01000136.1 Pseudomonas syringae pv. syringae strain 544 Contig_254, whole genome shotgun sequence (28176 bp)
Overview 1 RT 1: 147-6183 bp Neighborhood of RT #1 [147, 6183] UvrD UvrD YbjD YbjD RVT-UG16 Feature: gene Location: 147-1361 bp Feature: domain Description: UvrD Location: 405-570 bp Feature: domain Description: UvrD Location: 405-570 bp Feature: domain Description: UvrD Location: 1155-1317 bp Feature: domain Description: UvrD Location: 1 1 55-1 31 7 bp Feature: gene Location: 1412-3199 bp Feature: domain Description: YbjD Location: 1415-1634 bp Feature: domain Description: YbjD Location: 1 41 5-1 634 bp Feature: domain Description: YbjD Location: 2198-2849 bp Feature: domain Description: YbjD Location: 21 98-2849 bp Feature: gene Location: 3320-4840 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 3713-4094 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 371 3-4094 bp Feature: gene Location: 5474-5611 bp Feature: gene Location: 5635-6183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), YbjD (COG3593), RVT-UG16

Seq: QPBW01000043.1 Pseudomonas syringae pv. syringae strain 544 Contig_55, whole genome shotgun sequence (59275 bp)
Overview 1 RT 1: 43674-48764 bp Neighborhood of RT #1 [43674, 48764] SIR2_2 YjgR YjgR RVT-Retrons Feature: gene Location: 43674-44804 bp Feature: domain Description: SIR2_2 Location: 44022-44709 bp Feature: domain Description: SIR2 _2 Location: 4402 2 -44709 bp Feature: gene Location: 44804-46573 bp Feature: domain Description: YjgR Location: 45140-45395 bp Feature: domain Description: YjgR Location: 45140-45395 bp Feature: domain Description: YjgR Location: 46139-46514 bp Feature: domain Description: YjgR Location: 46139-46514 bp Feature: gene Location: 46920-47948 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47136-47685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47136-47685 bp Feature: gene Location: 47922-48131 bp Feature: gene Location: 48564-48764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-Retrons