myRT

myRT report for GCA_003412715.1_ASM341271v1

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Seq: QPBV01000124.1 Pseudomonas syringae pv. syringae strain 543 Contig_124, whole genome shotgun sequence (11039 bp)
Overview 1 RT 1: 5643-10849 bp Neighborhood of RT #1 [5643, 10893] RVT-UG16 YbjD YbjD UvrD UvrD Feature: gene Location: 5643-5840 bp Feature: gene Location: 5978-6145 bp Feature: gene Location: 6200-7720 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 6593-6974 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 6593-6974 bp Feature: gene Location: 7841-9628 bp Feature: domain Description: YbjD Location: 7844-8063 bp Feature: domain Description: YbjD Location: 7844-8063 bp Feature: domain Description: YbjD Location: 8627-9278 bp Feature: domain Description: YbjD Location: 8627-9278 bp Feature: gene Location: 9679-10893 bp Feature: domain Description: UvrD Location: 9937-10102 bp Feature: domain Description: UvrD Location: 9937-1 01 02 bp Feature: domain Description: UvrD Location: 10687-10849 bp Feature: domain Description: UvrD Location: 1 0687-1 0849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, YbjD (COG3593), UvrD (COG0210)

Seq: QPBV01000032.1 Pseudomonas syringae pv. syringae strain 543 Contig_32, whole genome shotgun sequence (47426 bp)
Overview 1 RT 1: 36447-43832 bp Neighborhood of RT #1 [36447, 43927] Glyco_hydro_10 RVT-Retrons YjgR YjgR SIR2_2 Feature: gene Location: 36447-37493 bp Feature: domain Description: Glyco_hydro_10 Location: 36489-37449 bp Feature: domain Description: Glyco_hydro_10 Location: 36489-37449 bp Feature: gene Location: 38192-39037 bp Feature: gene Location: 39653-40681 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39869-40418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39869-40418 bp Feature: gene Location: 41028-42797 bp Feature: domain Description: YjgR Location: 41364-41619 bp Feature: domain Description: YjgR Location: 41364-41619 bp Feature: domain Description: YjgR Location: 42363-42738 bp Feature: domain Description: YjgR Location: 42 363-42 738 bp Feature: gene Location: 42797-43927 bp Feature: domain Description: SIR2_2 Location: 43145-43832 bp Feature: domain Description: SIR2 _2 Location: 43145-43832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_10 (pfam00331), RVT-Retrons, YjgR (COG0433), SIR2_2 (pfam13289)