myRT

myRT report for GCA_003412935.1_ASM341293v1

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Seq: QPBJ01000030.1 Pseudomonas syringae pv. syringae strain 529 Contig_30, whole genome shotgun sequence (87613 bp)
Overview 1 RT 1: 43675-49410 bp Neighborhood of RT #1 [43675, 49410] SIR2_2 YjgR YjgR RVT-Retrons Feature: gene Location: 43675-44805 bp Feature: domain Description: SIR2_2 Location: 44023-44710 bp Feature: domain Description: SIR2_2 Location: 44023-4471 0 bp Feature: gene Location: 44805-46574 bp Feature: domain Description: YjgR Location: 45141-45396 bp Feature: domain Description: YjgR Location: 451 41 -45396 bp Feature: domain Description: YjgR Location: 46140-46515 bp Feature: domain Description: YjgR Location: 461 40-4651 5 bp Feature: gene Location: 46921-47949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47137-47686 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 471 37-47686 bp Feature: gene Location: 47923-48132 bp Feature: gene Location: 48565-49410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-Retrons

Seq: QPBJ01000043.1 Pseudomonas syringae pv. syringae strain 529 Contig_43, whole genome shotgun sequence (55061 bp)
Overview 1 RT 1: 36529-43296 bp Neighborhood of RT #1 [36529, 43340] RVT-UG16 YbjD YbjD UvrD UvrD Feature: gene Location: 36529-36960 bp Feature: gene Location: 37304-37852 bp Feature: gene Location: 38647-40167 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 39040-39421 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 39040-3942 1 bp Feature: gene Location: 40288-42075 bp Feature: domain Description: YbjD Location: 40291-40510 bp Feature: domain Description: YbjD Location: 402 91-40510 bp Feature: domain Description: YbjD Location: 41074-41725 bp Feature: domain Description: YbjD Location: 41074-4172 5 bp Feature: gene Location: 42126-43340 bp Feature: domain Description: UvrD Location: 42384-42549 bp Feature: domain Description: UvrD Location: 42 384-42 549 bp Feature: domain Description: UvrD Location: 43134-43296 bp Feature: domain Description: UvrD Location: 43134-432 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, YbjD (COG3593), UvrD (COG0210)