myRT

myRT report for GCA_003415595.1_ASM341559v1

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Seq: QVIJ01000058.1 Salmonella enterica strain AR-18 NODE_58_length_27877_cov_29.6307, whole genome shotgun sequence (27877 bp)
Overview 1 RT 1: 11542-15670 bp Neighborhood of RT #1 [11542, 15675] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 11542-12285 bp Feature: gene Location: 12504-12713 bp Feature: gene Location: 12848-14749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13115-13946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 5-1 3946 bp Feature: domain Description: Intron_maturas2 Location: 14060-14318 bp Feature: domain Description: Intron_maturas2 Location: 1 4060-1 431 8 bp Feature: domain Description: HNHc Note: nucleases Location: 14492-14654 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4492-1 4654 bp Feature: gene Location: 14944-15384 bp Feature: domain Description: PRK13732 Location: 14950-15382 bp Feature: domain Description: PRK1 3732 Location: 1 4950-1 5382 bp Feature: gene Location: 15442-15675 bp Feature: domain Description: DUF905 Location: 15472-15670 bp Feature: domain Description: DUF905 Location: 1 5472-1 5670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: QVIJ01000068.1 Salmonella enterica strain AR-18 NODE_68_length_22648_cov_19.5031, whole genome shotgun sequence (22648 bp)
Overview 1 RT 1: 19969-22629 bp Neighborhood of RT #1 [19969, 22646] PRK09692 RVT-UG5 Feature: gene Location: 19969-20187 bp Feature: gene Location: 20332-21582 bp Feature: domain Description: PRK09692 Location: 20341-21541 bp Feature: domain Description: PRK09692 Location: 2 0341-2 1541 bp Feature: gene Location: 21648-22646 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22125-22629 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 12 5-2 2 62 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5