myRT

myRT report for GCA_003416715.1_ASM341671v1

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Seq: QPCI01000030.1 Pseudomonas cichorii strain REF Contig_30, whole genome shotgun sequence (238053 bp)
Overview 1 RT 1: 70421-76653 bp Neighborhood of RT #1 [70421, 76653] HTH_LacI PBP1_uncharacterized_sugar_binding RVT-Retrons Trypsin_2 Feature: gene Location: 70421-71479 bp Feature: domain Description: HTH_LacI Location: 70454-70601 bp Feature: domain Description: HTH_LacI Location: 70454-70601 bp Feature: domain Description: PBP1_uncharacterized_sugar_binding Location: 70625-71450 bp Feature: domain Description: PBP1 _uncharacterized_sugar_binding Location: 70625-71 450 bp Feature: gene Location: 72761-73684 bp Feature: gene Location: 73938-75737 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74085-74688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74085-74688 bp Feature: domain Description: Trypsin_2 Location: 75081-75501 bp Feature: domain Description: Trypsin_2 Location: 75081 -75501 bp Feature: gene Location: 76055-76294 bp Feature: gene Location: 76441-76653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_LacI (cd01392), PBP1_uncharacterized_sugar_binding, RVT-Retrons, Trypsin_2 (pfam13365)

Seq: QPCI01000041.1 Pseudomonas cichorii strain REF Contig_41, whole genome shotgun sequence (17562 bp)
Overview 1 RT 1: 11876-17528 bp Neighborhood of RT #1 [11876, 17560] TAS_TAS_TAS_TIGR02293 ABC_ATPase RVT-UG7 DUF3732 Feature: gene Location: 11876-12154 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 11999-12152 bp Feature: domain Description: TAS_TAS_TAS_TIGR02 2 93 Location: 11999-12 152 bp Feature: gene Location: 12398-15025 bp Feature: domain Description: ABC_ATPase Location: 12683-14504 bp Feature: domain Description: ABC_ATPase Location: 12 683-14504 bp Feature: gene Location: 15076-16635 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15451-15868 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15451-15868 bp Feature: gene Location: 16785-16922 bp Feature: gene Location: 16934-17560 bp Feature: domain Description: DUF3732 Location: 16958-17528 bp Feature: domain Description: DUF3732 Location: 16958-1752 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TAS_TAS_TAS_TIGR02293, ABC_ATPase (pfam09818), RVT-UG7, DUF3732 (pfam12532)