myRT

myRT report for GCA_003416895.1_ASM341689v1

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Seq: QVIO01000002.1 Duganella sp. BJB476 NODE_2_length_825810_cov_20.350833, whole genome shotgun sequence (825810 bp)
Overview 1 RT 1: 53126-57385 bp 2 RT 2: 147712-156167 bp Neighborhood of RT #1 [53126, 57966] FGE-sulfatase Avd_like RVT-DGRs DUF5131 MmcB-like Neighborhood of RT #2 [147712, 156181] SDR_a7 DUF945 RVT-Retrons COG4805 PleD PRK10060 Feature: gene Location: 53126-53860 bp Feature: domain Description: FGE-sulfatase Location: 53294-53849 bp Feature: domain Description: FGE-sulfatase Location: 53294-53849 bp Feature: gene Location: 53935-54789 bp Feature: domain Description: Avd_like Location: 54478-54769 bp Feature: domain Description: Avd_like Location: 54478-54769 bp Feature: gene Location: 54786-56084 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55272-55920 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55272-55920 bp Feature: gene Location: 56081-57067 bp Feature: domain Description: DUF5131 Location: 56093-57056 bp Feature: domain Description: DUF51 31 Location: 56093-57056 bp Feature: gene Location: 57064-57966 bp Feature: domain Description: MmcB-like Location: 57226-57385 bp Feature: domain Description: MmcB-like Location: 57226-57385 bp Feature: gene Location: 147712-148608 bp Feature: domain Description: SDR_a7 Location: 147715-148579 bp Feature: domain Description: SDR_a7 Location: 1 4771 5-1 48579 bp Feature: gene Location: 148612-149973 bp Feature: domain Description: DUF945 Location: 148828-149893 bp Feature: domain Description: DUF945 Location: 1 48828-1 49893 bp Feature: gene Location: 150300-151670 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150807-151437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 50807-1 51 437 bp Feature: gene Location: 152170-153954 bp Feature: domain Description: COG4805 Location: 152251-153919 bp Feature: domain Description: COG4805 Location: 1 52251 -1 5391 9 bp Feature: gene Location: 153977-156181 bp Feature: domain Description: PleD Location: 153992-154424 bp Feature: domain Description: PleD Location: 1 53992-1 54424 bp Feature: domain Description: PRK10060 Location: 154499-156167 bp Feature: domain Description: PRK1 0060 Location: 1 54499-1 561 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, DUF5131 (pfam07505), MmcB-like (pfam06319), SDR_a7 (cd05262), DUF945 (pfam06097), RVT-Retrons, COG4805 (Uncharacterized conserved protein, DUF885 familyt ), PleD (COG3706)
PRK10060 (cyclic di-GMP phosphodiesterase)