myRT

myRT report for GCA_003416945.1_ASM341694v1

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Seq: QVIP01000017.1 Duganella sp. BJB475 NODE_17_length_93534_cov_34.137110, whole genome shotgun sequence (93534 bp)
Overview 1 RT 1: 90032-92882 bp Neighborhood of RT #1 [90032, 93448] Prok-E2_B ThiF_MoeB_HesA_family RVT-UG17 Feature: gene Location: 90032-91666 bp Feature: domain Description: Prok-E2_B Location: 90194-90398 bp Feature: domain Description: Prok-E2_B Location: 901 94-90398 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 90899-91325 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 90899-91 325 bp Feature: gene Location: 91698-92000 bp Feature: gene Location: 92486-93448 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 92525-92882 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 92525-92882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prok-E2_B (pfam14461), ThiF_MoeB_HesA_family (cd00757), RVT-UG17

Seq: QVIP01000001.1 Duganella sp. BJB475 NODE_1_length_1635378_cov_37.678306, whole genome shotgun sequence (1635378 bp)
Overview 1 RT 1: 1103019-1107122 bp Neighborhood of RT #1 [1103019, 1107122] ASCH_yqfb_like ASCH_yqfb_like rdgC Ftsk_gamma RVT-DGRs Avd_like Feature: gene Location: 1103019-1103750 bp Feature: domain Description: ASCH_yqfb_like Location: 1103064-1103109 bp Feature: domain Description: ASCH_yqfb_like Location: 1103064-1103109 bp Feature: domain Description: ASCH_yqfb_like Location: 1103490-1103574 bp Feature: domain Description: ASCH_yqfb_like Location: 1103490-1103574 bp Feature: gene Location: 1103747-1104928 bp Feature: domain Description: rdgC Location: 1103750-1104623 bp Feature: domain Description: rdgC Location: 1103750-110462 3 bp Feature: domain Description: Ftsk_gamma Location: 1104734-1104890 bp Feature: domain Description: Ftsk_gamma Location: 1104734-1104890 bp Feature: gene Location: 1104921-1106081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1105140-1105827 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1105140-110582 7 bp Feature: gene Location: 1106332-1106691 bp Feature: domain Description: Avd_like Location: 1106359-1106662 bp Feature: domain Description: Avd_like Location: 1106359-1106662 bp Feature: gene Location: 1106712-1107122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ASCH_yqfb_like (cd06552), rdgC (PRK00321), Ftsk_gamma (smart00843), RVT-DGRs, Avd_like (cd16376)

Seq: QVIP01000002.1 Duganella sp. BJB475 NODE_2_length_765533_cov_39.253549, whole genome shotgun sequence (765533 bp)
Overview 1 RT 1: 669620-678060 bp Neighborhood of RT #1 [669620, 678089] PleD PRK10060 COG4805 RVT-Retrons DUF945 SDR_a7 Feature: gene Location: 669620-671824 bp Feature: domain Description: PleD Location: 669635-670067 bp Feature: domain Description: PleD Location: 66963 5-670067 bp Feature: domain Description: PRK10060 Location: 670142-671810 bp Feature: domain Description: PRK10060 Location: 670142-671810 bp Feature: gene Location: 671775-673631 bp Feature: domain Description: COG4805 Location: 671928-673596 bp Feature: domain Description: COG4805 Location: 671928-673 596 bp Feature: gene Location: 674131-675501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 674638-675268 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67463 8-675268 bp Feature: gene Location: 675828-677189 bp Feature: domain Description: DUF945 Location: 676044-677109 bp Feature: domain Description: DUF945 Location: 676044-677109 bp Feature: gene Location: 677193-678089 bp Feature: domain Description: SDR_a7 Location: 677196-678060 bp Feature: domain Description: SDR_a7 Location: 677196-678060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PleD (COG3706), PRK10060 (cyclic di-GMP phosphodiesterase), COG4805 (Uncharacterized conserved protein, DUF885 familyt ), RVT-Retrons, DUF945 (pfam06097), SDR_a7 (cd05262)