myRT

myRT report for GCA_003419275.1_ASM341927v1

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Seq: PDAZ01000021.1 Salmonella enterica strain 2016K-0150 NODE_21_length_57454_cov_34.0281, whole genome shotgun sequence (57454 bp)
Overview 1 RT 1: 51908-56487 bp Neighborhood of RT #1 [51908, 56987] SLATT_5 RVT-UG17 ANK ANK Feature: gene Location: 51908-52054 bp Feature: gene Location: 52584-53135 bp Feature: domain Description: SLATT_5 Location: 52602-53121 bp Feature: domain Description: SLATT_5 Location: 52602-531 21 bp Feature: gene Location: 53074-54501 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 53359-53965 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 53359-53965 bp Feature: gene Location: 55015-55737 bp Feature: gene Location: 56001-56987 bp Feature: domain Description: ANK Location: 56055-56301 bp Feature: domain Description: ANK Location: 56055-56301 bp Feature: domain Description: ANK Location: 56328-56487 bp Feature: domain Description: ANK Location: 56328-56487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, ANK (smart00248)

Seq: PDAZ01000035.1 Salmonella enterica strain 2016K-0150 NODE_35_length_5338_cov_27.1712, whole genome shotgun sequence (5338 bp)
Overview 1 RT 1: 2-3750 bp Neighborhood of RT #1 [2, 3764] RVT-UG8 RVT-UG3 AlpA Feature: gene Location: 2-976 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 578-974 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 578-974 bp Feature: gene Location: 967-2334 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1348-1843 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1348-1843 bp Feature: gene Location: 2563-3432 bp Feature: gene Location: 3555-3764 bp Feature: domain Description: AlpA Location: 3561-3750 bp Feature: domain Description: AlpA Location: 3561-3750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, AlpA (COG3311)

Seq: PDAZ01000046.1 Salmonella enterica strain 2016K-0150 NODE_46_length_666_cov_3.10575, whole genome shotgun sequence (666 bp)
Overview 1 RT 1: 1-139 bp Neighborhood of RT #1 [1, 663] RVT-UG8 Feature: gene Location: 1-663 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4-139 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4-13 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8