myRT

myRT report for GCA_003420565.1_ASM342056v1

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Seq: BDYS01000041.1 Staphylococcus aureus DNA, scaffold41, strain: M6C025, whole genome shotgun sequence (5553 bp)
Overview 1 RT 1: 100-5552 bp Neighborhood of RT #1 [100, 5552] L1-EN RVT-GII Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 100-351 bp Feature: gene Location: 417-4235 bp Feature: domain Description: L1-EN Location: 444-1125 bp Feature: domain Description: L1 -EN Location: 444-1 1 25 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1995-2637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 995-2637 bp Feature: gene Location: 4287-5213 bp Feature: domain Description: Tnp_22_trimer Location: 4581-4704 bp Feature: domain Description: Tnp_22_trimer Location: 4581 -4704 bp Feature: domain Description: Transposase_22 Location: 4722-5004 bp Feature: domain Description: Transposase_22 Location: 4722-5004 bp Feature: domain Description: Tnp_22_dsRBD Location: 5016-5202 bp Feature: domain Description: Tnp_22_dsRBD Location: 501 6-5202 bp Feature: gene Location: 5238-5552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: BDYS01000056.1 Staphylococcus aureus DNA, scaffold56, strain: M6C025, whole genome shotgun sequence (979 bp)
Overview 1 RT 1: 3-285 bp Neighborhood of RT #1 [3, 890] RVT-CRISPR-like Feature: gene Location: 3-890 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9-285 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9-2 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: BDYS01000063.1 Staphylococcus aureus DNA, scaffold63, strain: M6C025, whole genome shotgun sequence (627 bp)
Overview 1 RT 1: 2-611 bp Neighborhood of RT #1 [2, 625] RVT-CRISPR-like Feature: gene Location: 2-625 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 176-611 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 176-611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR