myRT

myRT report for GCA_003421365.1_ASM342136v1

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Seq: BEAB01000015.1 Staphylococcus aureus DNA, scaffold15, strain: M6K023, whole genome shotgun sequence (21564 bp)
Overview 1 RT 1: 15972-19989 bp Neighborhood of RT #1 [15972, 19989] PinE RVT-AbiK Feature: gene Location: 15972-16583 bp Feature: domain Description: PinE Location: 15975-16569 bp Feature: domain Description: PinE Location: 1 5975-1 6569 bp Feature: gene Location: 16707-17030 bp Feature: gene Location: 17241-18479 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 17715-18105 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 771 5-1 81 05 bp Feature: gene Location: 19189-19815 bp Feature: gene Location: 19825-19989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-AbiK

Seq: BEAB01000019.1 Staphylococcus aureus DNA, scaffold19, strain: M6K023, whole genome shotgun sequence (5928 bp)
Overview 1 RT 1: 128-5671 bp Neighborhood of RT #1 [128, 5671] L1-EN RVT-GII Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 128-379 bp Feature: gene Location: 445-4263 bp Feature: domain Description: L1-EN Location: 472-1153 bp Feature: domain Description: L1-EN Location: 472 -1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2023-2677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 3-2 677 bp Feature: gene Location: 4315-5241 bp Feature: domain Description: Tnp_22_trimer Location: 4609-4732 bp Feature: domain Description: Tnp_2 2 _trimer Location: 4609-4732 bp Feature: domain Description: Transposase_22 Location: 4744-5032 bp Feature: domain Description: Transposase_2 2 Location: 4744-5032 bp Feature: domain Description: Tnp_22_dsRBD Location: 5044-5230 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 5044-52 30 bp Feature: gene Location: 5534-5671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: BEAB01000022.1 Staphylococcus aureus DNA, scaffold22, strain: M6K023, whole genome shotgun sequence (2893 bp)
Overview 1 RT 1: 378-2889 bp Neighborhood of RT #1 [378, 2891] L1-EN L1-EN RVT-UNC Feature: gene Location: 378-929 bp Feature: domain Description: L1-EN Location: 720-924 bp Feature: domain Description: L1-EN Location: 720-924 bp Feature: gene Location: 966-1319 bp Feature: domain Description: L1-EN Location: 972-1314 bp Feature: domain Description: L1-EN Location: 972-13 14 bp Feature: gene Location: 1512-2891 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2250-2889 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2250-2889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR/RVT-GII/RVT-UG27(RVT-UNC)