myRT

myRT report for GCA_003421745.1_ASM342174v1

Download annotations/find similar RTs

Seq: BEAU01000039.1 Staphylococcus aureus DNA, scaffold39, strain: M6K068, whole genome shotgun sequence (6311 bp)
Overview 1 RT 1: 584-6216 bp Neighborhood of RT #1 [584, 6216] Tnp_22_trimer Transposase_22 Tnp_22_dsRBD L1-EN RVT-GII Feature: gene Location: 584-1510 bp Feature: domain Description: Tnp_22_trimer Location: 878-1001 bp Feature: domain Description: Tnp_22_trimer Location: 878-1 001 bp Feature: domain Description: Transposase_22 Location: 1013-1301 bp Feature: domain Description: Transposase_22 Location: 1 01 3-1 301 bp Feature: domain Description: Tnp_22_dsRBD Location: 1313-1499 bp Feature: domain Description: Tnp_22_dsRBD Location: 1 31 3-1 499 bp Feature: gene Location: 1562-5380 bp Feature: domain Description: L1-EN Location: 1589-2270 bp Feature: domain Description: L1 -EN Location: 1 589-2270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140-3794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 40-3794 bp Feature: gene Location: 5446-5703 bp Feature: gene Location: 6004-6216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-GII

Seq: BEAU01000046.1 Staphylococcus aureus DNA, scaffold46, strain: M6K068, whole genome shotgun sequence (2448 bp)
Overview 1 RT 1: 3-2446 bp Neighborhood of RT #1 [3, 2446] L1-EN RVT-UNC Feature: gene Location: 3-1823 bp Feature: domain Description: L1-EN Location: 9-696 bp Feature: domain Description: L1-EN Location: 9-696 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1512-1788 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1512 -1788 bp Feature: gene Location: 1869-2186 bp Feature: gene Location: 2225-2446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG2/RVT-CRISPR/RVT-DGRs/RVT-UG28b(RVT-UNC)

Seq: BEAU01000097.1 Staphylococcus aureus DNA, scaffold97, strain: M6K068, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 1-220 bp Neighborhood of RT #1 [1, 246] RVT-UG28 Feature: gene Location: 1-246 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 25-220 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 25-220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28