myRT

myRT report for GCA_003422045.1_ASM342204v1

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Seq: BEBJ01000023.1 Staphylococcus aureus DNA, scaffold23, strain: M6K100, whole genome shotgun sequence (5394 bp)
Overview 1 RT 1: 154-5246 bp Neighborhood of RT #1 [154, 5254] L1-EN RVT-GII Tnp_22_trimer Transposase_22 Feature: gene Location: 154-336 bp Feature: gene Location: 458-4276 bp Feature: domain Description: L1-EN Location: 485-1166 bp Feature: domain Description: L1 -EN Location: 485-1 1 66 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2690 bp Feature: gene Location: 4661-5254 bp Feature: domain Description: Tnp_22_trimer Location: 4955-5078 bp Feature: domain Description: Tnp_22_trimer Location: 4955-5078 bp Feature: domain Description: Transposase_22 Location: 5096-5246 bp Feature: domain Description: Transposase_22 Location: 5096-5246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994)

Seq: BEBJ01000025.1 Staphylococcus aureus DNA, scaffold25, strain: M6K100, whole genome shotgun sequence (3479 bp)
Overview 1 RT 1: 79-3237 bp Neighborhood of RT #1 [79, 3237] L1-EN RVT-UNC L1-EN Feature: gene Location: 79-2649 bp Feature: domain Description: L1-EN Location: 85-547 bp Feature: domain Description: L1-EN Location: 85-547 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1366-2002 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1366-2 002 bp Feature: gene Location: 2686-2874 bp Feature: domain Description: L1-EN Location: 2692-2869 bp Feature: domain Description: L1-EN Location: 2 692 -2 869 bp Feature: gene Location: 2920-3237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC)