myRT

myRT report for GCA_003423465.1_ASM342346v1

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Seq: BEDJ01000013.1 Staphylococcus aureus DNA, scaffold13, strain: M6K221, whole genome shotgun sequence (15488 bp)
Overview 1 RT 1: 10748-14031 bp Neighborhood of RT #1 [10748, 14031] RVT-AbiK Feature: gene Location: 10748-11071 bp Feature: gene Location: 10996-11400 bp Feature: gene Location: 11460-12518 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 11934-12324 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 1 934-1 2324 bp Feature: gene Location: 13231-13857 bp Feature: gene Location: 13867-14031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK

Seq: BEDJ01000015.1 Staphylococcus aureus DNA, scaffold15, strain: M6K221, whole genome shotgun sequence (6139 bp)
Overview 1 RT 1: 126-5228 bp Neighborhood of RT #1 [126, 5239] L1-EN RVT-GII Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 126-377 bp Feature: gene Location: 443-4261 bp Feature: domain Description: L1-EN Location: 470-1151 bp Feature: domain Description: L1-EN Location: 470-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2018-2678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 018-2 678 bp Feature: gene Location: 4313-5239 bp Feature: domain Description: Tnp_22_trimer Location: 4607-4730 bp Feature: domain Description: Tnp_2 2 _trimer Location: 4607-4730 bp Feature: domain Description: Transposase_22 Location: 4742-5030 bp Feature: domain Description: Transposase_2 2 Location: 4742 -5030 bp Feature: domain Description: Tnp_22_dsRBD Location: 5042-5228 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 5042 -52 2 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: BEDJ01000022.1 Staphylococcus aureus DNA, scaffold22, strain: M6K221, whole genome shotgun sequence (2522 bp)
Overview 1 RT 1: 2-2520 bp Neighborhood of RT #1 [2, 2520] L1-EN RVT-UNC Feature: gene Location: 2-1879 bp Feature: domain Description: L1-EN Location: 8-695 bp Feature: domain Description: L1-EN Location: 8-695 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1511-1811 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1511-1811 bp Feature: gene Location: 1925-2242 bp Feature: gene Location: 2281-2520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG2/RVT-CRISPR/RVT-DGRs/RVT-GII(RVT-UNC)

Seq: BEDJ01000032.1 Staphylococcus aureus DNA, scaffold32, strain: M6K221, whole genome shotgun sequence (906 bp)
Overview 1 RT 1: 1-151 bp Neighborhood of RT #1 [1, 795] RVT-CRISPR-like Feature: gene Location: 1-795 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10-151 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10-151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR