myRT

myRT report for GCA_003423645.1_ASM342364v1

Download annotations/find similar RTs

Seq: BEDS01000027.1 Staphylococcus aureus DNA, scaffold27, strain: M6K233, whole genome shotgun sequence (5730 bp)
Overview 1 RT 1: 453-5566 bp Neighborhood of RT #1 [453, 5566] Tnp_22_trimer Transposase_22 Tnp_22_dsRBD L1-EN RVT-GII Feature: gene Location: 453-1379 bp Feature: domain Description: Tnp_22_trimer Location: 747-870 bp Feature: domain Description: Tnp_22_trimer Location: 747-870 bp Feature: domain Description: Transposase_22 Location: 882-1170 bp Feature: domain Description: Transposase_22 Location: 882-1 1 70 bp Feature: domain Description: Tnp_22_dsRBD Location: 1182-1368 bp Feature: domain Description: Tnp_22_dsRBD Location: 1 1 82-1 368 bp Feature: gene Location: 1431-5249 bp Feature: domain Description: L1-EN Location: 1458-2139 bp Feature: domain Description: L1 -EN Location: 1 458-21 39 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006-3663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006-3663 bp Feature: gene Location: 5315-5566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-GII

Seq: BEDS01000042.1 Staphylococcus aureus DNA, scaffold42, strain: M6K233, whole genome shotgun sequence (942 bp)
Overview 1 RT 1: 3-144 bp Neighborhood of RT #1 [3, 788] RVT-CRISPR-like Feature: gene Location: 3-788 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 15-144 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 15-144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: BEDS01000045.1 Staphylococcus aureus DNA, scaffold45, strain: M6K233, whole genome shotgun sequence (787 bp)
Overview 1 RT 1: 3-783 bp Neighborhood of RT #1 [3, 785] RVT-CRISPR-like Feature: gene Location: 3-785 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 234-783 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 23 4-783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR