myRT

myRT report for GCA_003427645.1_ASM342764v1

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Seq: QNTK01000005.1 Escherichia coli strain L168 L168_S40_contig_5, whole genome shotgun sequence (28795 bp)
Overview 1 RT 1: 23059-26868 bp Neighborhood of RT #1 [23059, 26868] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 23059-23361 bp Feature: domain Description: InsE Location: 23068-23350 bp Feature: domain Description: InsE Location: 23068-23350 bp Feature: gene Location: 23388-23813 bp Feature: domain Description: PHA02517 Location: 23412-23748 bp Feature: domain Description: PHA0251 7 Location: 2341 2-23748 bp Feature: gene Location: 24405-25928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24678-25410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24678-2541 0 bp Feature: domain Description: GIIM Note: maturase Location: 25485-25683 bp Feature: domain Description: GIIM Note: maturase Location: 25485-25683 bp Feature: gene Location: 26105-26404 bp Feature: domain Description: PHA02517 Location: 26108-26402 bp Feature: domain Description: PHA0251 7 Location: 261 08-26402 bp Feature: gene Location: 26719-26868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QNTK01000061.1 Escherichia coli strain L168 L168_S40_contig_61, whole genome shotgun sequence (4347 bp)
Overview 1 RT 1: 14-3219 bp Neighborhood of RT #1 [14, 3219] RVT-UG1 YeeP Feature: gene Location: 14-1381 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 626-1136 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 62 6-1136 bp Feature: gene Location: 1985-2857 bp Feature: domain Description: YeeP Location: 1988-2855 bp Feature: domain Description: YeeP Location: 1988-2 855 bp Feature: gene Location: 3034-3219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, YeeP (COG3596)

Seq: QNTK01000008.1 Escherichia coli strain L168 L168_S40_contig_8, whole genome shotgun sequence (234064 bp)
Overview 1 RT 1: 37677-41618 bp Neighborhood of RT #1 [37677, 41618] RVT-Retrons Feature: gene Location: 37677-37916 bp Feature: gene Location: 38223-38399 bp Feature: gene Location: 38472-40244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38631-39249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 863 1-3 9249 bp Feature: gene Location: 40266-40433 bp Feature: gene Location: 40479-41618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons