myRT

myRT report for GCA_003427965.1_ASM342796v1

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Seq: QNSM01000015.1 Escherichia coli strain L39 L39_S16_contig_15, whole genome shotgun sequence (91103 bp)
Overview 1 RT 1: 78045-83772 bp Neighborhood of RT #1 [78045, 84014] YeeP RVT-UG1 GerD Feature: gene Location: 78045-78230 bp Feature: gene Location: 78407-79279 bp Feature: domain Description: YeeP Location: 78410-79277 bp Feature: domain Description: YeeP Location: 7841 0-79277 bp Feature: gene Location: 79883-82354 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 80495-81005 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 80495-81 005 bp Feature: gene Location: 82456-83571 bp Feature: gene Location: 83580-84014 bp Feature: domain Description: GerD Location: 83658-83772 bp Feature: domain Description: GerD Location: 83658-83772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: QNSM01000021.1 Escherichia coli strain L39 L39_S16_contig_21, whole genome shotgun sequence (202510 bp)
Overview 1 RT 1: 5705-9646 bp Neighborhood of RT #1 [5705, 9646] RVT-Retrons Feature: gene Location: 5705-5944 bp Feature: gene Location: 6251-6427 bp Feature: gene Location: 6500-8272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6659-7277 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6659-72 77 bp Feature: gene Location: 8294-8461 bp Feature: gene Location: 8507-9646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QNSM01000055.1 Escherichia coli strain L39 L39_S16_contig_55, whole genome shotgun sequence (13207 bp)
Overview 1 RT 1: 10572-13202 bp Neighborhood of RT #1 [10572, 13204] PRK10173 PRK10173 RVT-GII InsE Feature: gene Location: 10572-11021 bp Feature: domain Description: PRK10173 Location: 10575-11013 bp Feature: domain Description: PRK10173 Location: 10575-11013 bp Feature: gene Location: 11005-11316 bp Feature: domain Description: PRK10173 Location: 11008-11227 bp Feature: domain Description: PRK10173 Location: 11008-11227 bp Feature: gene Location: 11355-11858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11628-11697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11628-11697 bp Feature: gene Location: 12489-12707 bp Feature: gene Location: 12929-13204 bp Feature: domain Description: InsE Location: 12971-13202 bp Feature: domain Description: InsE Location: 12971-13 202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, InsE (COG2963)