myRT

myRT report for GCA_003430295.1_ASM343029v1

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Seq: QUTQ01000001.1 Salmonella enterica strain CFSAN071935 CFSAN071935_1, whole genome shotgun sequence (715843 bp)
Overview 1 RT 1: 169586-175891 bp Neighborhood of RT #1 [169586, 175893] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 169586-171286 bp Feature: domain Description: 5 Location: 170810-171104 bp Feature: domain Description: 5 Location: 1 7081 0-1 71 1 04 bp Feature: gene Location: 171416-171583 bp Feature: gene Location: 172193-172957 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 172316-172769 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 7231 6-1 72769 bp Feature: gene Location: 173281-173787 bp Feature: domain Description: PRK10201 Location: 173284-173782 bp Feature: domain Description: PRK1 0201 Location: 1 73284-1 73782 bp Feature: gene Location: 173911-175893 bp Feature: domain Description: PRK05658 Location: 174049-175891 bp Feature: domain Description: PRK05658 Location: 1 74049-1 75891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: QUTQ01000017.1 Salmonella enterica strain CFSAN071935 CFSAN071935_17, whole genome shotgun sequence (81554 bp)
Overview 1 RT 1: 31908-36833 bp Neighborhood of RT #1 [31908, 36841] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31908-32630 bp Feature: domain Description: INT_P4_C Location: 32028-32559 bp Feature: domain Description: INT_P4_C Location: 32 02 8-32 559 bp Feature: gene Location: 32955-33917 bp Feature: gene Location: 33917-34852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34028-34613 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3402 8-34613 bp Feature: gene Location: 35100-35309 bp Feature: gene Location: 35654-36841 bp Feature: domain Description: PRK10473 Location: 35657-36833 bp Feature: domain Description: PRK10473 Location: 35657-36833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)