myRT

myRT report for GCA_003430665.1_ASM343066v1

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Seq: QUVM01000013.1 Salmonella enterica strain CFSAN071990 CFSAN071990_13, whole genome shotgun sequence (77773 bp)
Overview 1 RT 1: 28472-33044 bp Neighborhood of RT #1 [28472, 33052] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 28472-28750 bp Feature: domain Description: INT_P4_C Location: 28502-28679 bp Feature: domain Description: INT_P4_C Location: 28502-28679 bp Feature: gene Location: 29075-30037 bp Feature: gene Location: 30037-30972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30148-30733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 301 48-30733 bp Feature: gene Location: 31318-31527 bp Feature: gene Location: 31865-33052 bp Feature: domain Description: PRK10473 Location: 31868-33044 bp Feature: domain Description: PRK1 0473 Location: 31 868-33044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: QUVM01000008.1 Salmonella enterica strain CFSAN071990 CFSAN071990_8, whole genome shotgun sequence (299109 bp)
Overview 1 RT 1: 179483-185614 bp Neighborhood of RT #1 [179483, 185614] RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM Feature: gene Location: 179483-179809 bp Feature: gene Location: 180240-180740 bp Feature: RT Description: RVT_N Location: 180303-180537 bp Feature: RT Description: RVT_N Location: 180303-180537 bp Feature: gene Location: 180637-181767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180640-181225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180640-1812 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 181279-181510 bp Feature: domain Description: GIIM Note: maturase Location: 1812 79-181510 bp Feature: gene Location: 181952-182245 bp Feature: gene Location: 182648-182896 bp Feature: gene Location: 183501-183635 bp Feature: RT Description: RVT_N Location: 183552-183630 bp Feature: RT Description: RVT_N Location: 183552 -183630 bp Feature: gene Location: 183750-185033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183840-184485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183840-184485 bp Feature: domain Description: GIIM Note: maturase Location: 184539-184770 bp Feature: domain Description: GIIM Note: maturase Location: 184539-184770 bp Feature: gene Location: 185184-185432 bp Feature: gene Location: 185480-185614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)