myRT

myRT report for GCA_003431575.1_ASM343157v1

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Seq: PECY01000018.1 Mycobacterium marinum strain VIMS9 VIMS_contig000018, whole genome shotgun sequence (42179 bp)
Overview 1 RT 1: 23691-30223 bp Neighborhood of RT #1 [23691, 30223] STKc_PknB_like RVT-GII GIIM Feature: gene Location: 23691-24350 bp Feature: gene Location: 25199-27130 bp Feature: domain Description: STKc_PknB_like Location: 25232-26024 bp Feature: domain Description: STKc_PknB_like Location: 25232-26024 bp Feature: gene Location: 27241-28887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27865-28489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27865-28489 bp Feature: domain Description: GIIM Note: maturase Location: 28582-28804 bp Feature: domain Description: GIIM Note: maturase Location: 28582-28804 bp Feature: gene Location: 29104-29433 bp Feature: gene Location: 30041-30223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388)

Seq: PECY01000027.1 Mycobacterium marinum strain VIMS9 VIMS_contig000027, whole genome shotgun sequence (158866 bp)
Overview 1 RT 1: 154608-158322 bp Neighborhood of RT #1 [154608, 158768] OafA RVT_N RVT-GII GIIM Feature: gene Location: 154608-155750 bp Feature: domain Description: OafA Location: 154656-155733 bp Feature: domain Description: OafA Location: 154656-155733 bp Feature: gene Location: 155788-156102 bp Feature: gene Location: 157008-158768 bp Feature: RT Description: RVT_N Location: 157083-157326 bp Feature: RT Description: RVT_N Location: 157083-15732 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157380-158037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157380-158037 bp Feature: domain Description: GIIM Note: maturase Location: 158088-158322 bp Feature: domain Description: GIIM Note: maturase Location: 158088-15832 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OafA (COG1835), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PECY01000033.1 Mycobacterium marinum strain VIMS9 VIMS_contig000033, whole genome shotgun sequence (102065 bp)
Overview 1 RT 1: 99020-102010 bp Neighborhood of RT #1 [99020, 102036] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 99020-99481 bp Feature: domain Description: PHA02517 Location: 99089-99422 bp Feature: domain Description: PHA02517 Location: 99089-99422 bp Feature: gene Location: 99597-99788 bp Feature: gene Location: 100070-101461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100331-101018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003 3 1-101018 bp Feature: domain Description: GIIM Note: maturase Location: 101093-101288 bp Feature: domain Description: GIIM Note: maturase Location: 101093 -101288 bp Feature: gene Location: 101419-102036 bp Feature: domain Description: PHA02517 Location: 101584-102010 bp Feature: domain Description: PHA02517 Location: 101584-102010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PECY01000083.1 Mycobacterium marinum strain VIMS9 VIMS_contig000083, whole genome shotgun sequence (88248 bp)
Overview 1 RT 1: 73614-79449 bp Neighborhood of RT #1 [73614, 79550] YHI9 RVT-CRISPR-like RnaI Feature: gene Location: 73614-74030 bp Feature: gene Location: 74164-74952 bp Feature: domain Description: YHI9 Location: 74167-74944 bp Feature: domain Description: YHI9 Location: 74 167-74 94 4 bp Feature: gene Location: 75189-76520 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 75429-76050 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 754 29-76050 bp Feature: gene Location: 76513-78648 bp Feature: gene Location: 78768-79550 bp Feature: domain Description: RnaI Location: 78870-79449 bp Feature: domain Description: RnaI Location: 78870-794 4 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YHI9 (COG0384), RVT-CRISPR, RnaI (COG3719)

Seq: PECY01000162.1 Mycobacterium marinum strain VIMS9 VIMS_contig000162, whole genome shotgun sequence (11690 bp)
Overview 1 RT 1: 9343-11684 bp Neighborhood of RT #1 [9343, 11684] ZntA RVT-GII GIIM Feature: gene Location: 9343-9531 bp Feature: domain Description: ZntA Location: 9349-9451 bp Feature: domain Description: ZntA Location: 9349-945 1 bp Feature: gene Location: 9682-10119 bp Feature: gene Location: 10146-11507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10461-11094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10461-11094 bp Feature: domain Description: GIIM Note: maturase Location: 11175-11391 bp Feature: domain Description: GIIM Note: maturase Location: 11175 -11391 bp Feature: gene Location: 11541-11684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ZntA (COG2217)