myRT

myRT report for GCA_003431805.1_ASM343180v1

Download annotations/find similar RTs

Seq: PEDK01000008.1 Mycobacterium marinum strain DE4576 DE4576_contig000008, whole genome shotgun sequence (319202 bp)
Overview 1 RT 1: 81852-87784 bp Neighborhood of RT #1 [81852, 87784] RnaI RVT-CRISPR-like YHI9 Feature: gene Location: 81852-82634 bp Feature: domain Description: RnaI Location: 81954-82530 bp Feature: domain Description: RnaI Location: 81 954-82530 bp Feature: gene Location: 82799-84889 bp Feature: gene Location: 84882-86213 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 85122-85743 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 851 22-85743 bp Feature: gene Location: 86446-87234 bp Feature: domain Description: YHI9 Location: 86449-87226 bp Feature: domain Description: YHI9 Location: 86449-87226 bp Feature: gene Location: 87368-87784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnaI (COG3719), RVT-CRISPR, YHI9 (COG0384)

Seq: PEDK01000009.1 Mycobacterium marinum strain DE4576 DE4576_contig000009, whole genome shotgun sequence (487738 bp)
Overview 1 RT 1: 482908-486895 bp Neighborhood of RT #1 [482908, 487068] PE RVT-GII GIIM Feature: gene Location: 482908-483060 bp Feature: gene Location: 483214-485265 bp Feature: domain Description: PE Location: 483217-483493 bp Feature: domain Description: PE Location: 4832 17-483493 bp Feature: gene Location: 485677-487068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485938-486625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485938-48662 5 bp Feature: domain Description: GIIM Note: maturase Location: 486700-486895 bp Feature: domain Description: GIIM Note: maturase Location: 486700-486895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PE (pfam00934), RVT-GII, GIIM (pfam08388)