myRT

myRT report for GCA_003433675.1_ASM343367v1

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Seq: QVEM01000002.1 Streptococcus pasteurianus strain AM21-19 AM21-19.Scaf2, whole genome shotgun sequence (202711 bp)
Overview 1 RT 1: 167767-175504 bp 2 RT 2: 182665-193557 bp Neighborhood of RT #1 [167767, 175542] PrgI TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 Neighborhood of RT #2 [182665, 193557] N6_Mtase COG4646 COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF RVT_N RVT-GII GIIM Feature: gene Location: 167767-168120 bp Feature: domain Description: PrgI Location: 167779-168052 bp Feature: domain Description: PrgI Location: 1 67779-1 68052 bp Feature: gene Location: 168077-169570 bp Feature: domain Description: TraC-F-type Location: 168854-169256 bp Feature: domain Description: TraC-F-type Location: 1 68854-1 69256 bp Feature: gene Location: 170075-171772 bp Feature: RT Description: RVT_N Location: 170171-170411 bp Feature: RT Description: RVT_N Location: 1 701 71 -1 7041 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170459-171119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70459-1 71 1 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 171188-171407 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 1 88-1 71 407 bp Feature: gene Location: 171705-172739 bp Feature: domain Description: TraC-F-type Location: 171870-172563 bp Feature: domain Description: TraC-F-type Location: 1 71 870-1 72563 bp Feature: gene Location: 172741-175542 bp Feature: domain Description: PRK06149 Location: 174166-174427 bp Feature: domain Description: PRK061 49 Location: 1 741 66-1 74427 bp Feature: domain Description: Phage_lysozyme2 Location: 174538-175051 bp Feature: domain Description: Phage_lysozyme2 Location: 1 74538-1 75051 bp Feature: domain Description: PRK08581 Location: 175168-175504 bp Feature: domain Description: PRK08581 Location: 1 751 68-1 75504 bp Feature: gene Location: 182665-183216 bp Feature: gene Location: 183267-187097 bp Feature: domain Description: N6_Mtase Location: 185292-185883 bp Feature: domain Description: N6_Mtase Location: 1 85292-1 85883 bp Feature: domain Description: COG4646 Location: 186477-186648 bp Feature: domain Description: COG4646 Location: 1 86477-1 86648 bp Feature: domain Description: COG4646 Location: 186663-186954 bp Feature: domain Description: COG4646 Location: 1 86663-1 86954 bp Feature: gene Location: 187595-189373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187856-188648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87856-1 88648 bp Feature: domain Description: Intron_maturas2 Location: 188753-188984 bp Feature: domain Description: Intron_maturas2 Location: 1 88753-1 88984 bp Feature: domain Description: HNHc Note: nucleases Location: 189149-189335 bp Feature: domain Description: HNHc Note: nucleases Location: 1 891 49-1 89335 bp Feature: gene Location: 189511-190026 bp Feature: domain Description: SF2_C_SNF Location: 189688-189943 bp Feature: domain Description: SF2_C_SNF Location: 1 89688-1 89943 bp Feature: gene Location: 190394-192244 bp Feature: RT Description: RVT_N Location: 190631-190874 bp Feature: RT Description: RVT_N Location: 1 90631 -1 90874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190919-191567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9091 9-1 91 567 bp Feature: domain Description: GIIM Note: maturase Location: 191624-191852 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 624-1 91 852 bp Feature: gene Location: 192378-193187 bp Feature: gene Location: 193258-193557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )
Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793)

Seq: QVEM01000020.1 Streptococcus pasteurianus strain AM21-19 AM21-19.Scaf20, whole genome shotgun sequence (27662 bp)
Overview 1 RT 1: 17611-25244 bp Neighborhood of RT #1 [17611, 25327] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 17611-19821 bp Feature: gene Location: 19821-20660 bp Feature: domain Description: AAA_10 Location: 19824-20622 bp Feature: domain Description: AAA_10 Location: 1982 4-2 062 2 bp Feature: gene Location: 20878-22704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21178-21877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1178-2 1877 bp Feature: gene Location: 23401-24951 bp Feature: domain Description: AAA_10 Location: 24730-24913 bp Feature: domain Description: AAA_10 Location: 2 4730-2 4913 bp Feature: gene Location: 24929-25327 bp Feature: domain Description: TcpE Location: 24947-25244 bp Feature: domain Description: TcpE Location: 2 4947-2 52 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)