myRT

myRT report for GCA_003433925.1_ASM343392v1

Download annotations/find similar RTs

Seq: QVHZ01000001.1 Hungatella hathewayi strain AF31-1 AF31-1.Scaf1, whole genome shotgun sequence (1227394 bp)
Overview 1 RT 1: 26954-39873 bp 2 RT 2: 605872-608282 bp Neighborhood of RT #1 [26954, 39873] N6_N4_Mtase TraC-F-type RVT-GII HNHc PrgI Maff2 T4SS-DNA_transf RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [605872, 608282] NAT_SF YoaP RVT-Retrons Feature: gene Location: 26954-27910 bp Feature: domain Description: N6_N4_Mtase Location: 27032-27884 bp Feature: domain Description: N6_N4_Mtase Location: 27032-27884 bp Feature: gene Location: 27907-29262 bp Feature: domain Description: TraC-F-type Location: 27928-29086 bp Feature: domain Description: TraC-F-type Location: 27928-29086 bp Feature: gene Location: 29428-31401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29764-30502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29764-30502 bp Feature: domain Description: HNHc Note: nucleases Location: 31057-31195 bp Feature: domain Description: HNHc Note: nucleases Location: 31 057-31 1 95 bp Feature: gene Location: 32124-33107 bp Feature: gene Location: 33067-33459 bp Feature: domain Description: PrgI Location: 33085-33355 bp Feature: domain Description: PrgI Location: 33085-33355 bp Feature: gene Location: 35308-35556 bp Feature: domain Description: Maff2 Location: 35344-35551 bp Feature: domain Description: Maff2 Location: 35344-35551 bp Feature: gene Location: 35586-36902 bp Feature: domain Description: T4SS-DNA_transf Location: 35604-36732 bp Feature: domain Description: T4SS-DNA_transf Location: 35604-36732 bp Feature: gene Location: 36993-38810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37257-38076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37257-38076 bp Feature: domain Description: Intron_maturas2 Location: 38148-38451 bp Feature: domain Description: Intron_maturas2 Location: 381 48-38451 bp Feature: domain Description: HNHc Note: nucleases Location: 38631-38775 bp Feature: domain Description: HNHc Note: nucleases Location: 38631 -38775 bp Feature: gene Location: 39097-39237 bp Feature: gene Location: 39370-39873 bp Feature: gene Location: 605872-606036 bp Feature: gene Location: 606108-606851 bp Feature: domain Description: NAT_SF Location: 606315-606432 bp Feature: domain Description: NAT_SF Location: 60631 5-606432 bp Feature: domain Description: YoaP Location: 606714-606840 bp Feature: domain Description: YoaP Location: 60671 4-606840 bp Feature: gene Location: 606863-607819 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 606977-607532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 606977-607532 bp Feature: gene Location: 607469-607966 bp Feature: gene Location: 608079-608282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_N4_Mtase (pfam01555), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), PrgI (pfam12666), Maff2 (pfam12750), T4SS-DNA_transf (pfam02534), Intron_maturas2 (pfam01348), NAT_SF (cl17182), YoaP (pfam14268)
RVT-Retrons

Seq: QVHZ01000009.1 Hungatella hathewayi strain AF31-1 AF31-1.Scaf9, whole genome shotgun sequence (229471 bp)
Overview 1 RT 1: 155263-158928 bp Neighborhood of RT #1 [155263, 158948] DDE_5 RVT-GII GIIM RVT-GII MglA Feature: gene Location: 155263-155895 bp Feature: domain Description: DDE_5 Location: 155419-155785 bp Feature: domain Description: DDE_5 Location: 155419-155785 bp Feature: gene Location: 156113-156250 bp Feature: gene Location: 156377-156841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156383-156473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156383-156473 bp Feature: domain Description: GIIM Note: maturase Location: 156533-156758 bp Feature: domain Description: GIIM Note: maturase Location: 156533-156758 bp Feature: gene Location: 156922-157419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157288-157363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572 88-157363 bp Feature: gene Location: 157945-158154 bp Feature: gene Location: 158154-158948 bp Feature: domain Description: MglA Location: 158196-158928 bp Feature: domain Description: MglA Location: 158196-15892 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-GII, GIIM (pfam08388), MglA (COG1129)