myRT

myRT report for GCA_003434055.1_ASM343405v1

Download annotations/find similar RTs

Seq: QVEX01000002.1 [Clostridium] aldenense strain AF19-9LB AF19-9LB.Scaf2, whole genome shotgun sequence (425460 bp)
Overview 1 RT 1: 303164-309046 bp Neighborhood of RT #1 [303164, 309090] ArsD RVT-GII GIIM GIIM RVT-GII RVT-GII Tar PRK15048 Feature: gene Location: 303164-303382 bp Feature: domain Description: ArsD Location: 303185-303287 bp Feature: domain Description: ArsD Location: 3031 85-303287 bp Feature: gene Location: 303430-303558 bp Feature: gene Location: 303792-305033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303996-304653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303996-304653 bp Feature: domain Description: GIIM Note: maturase Location: 304734-304947 bp Feature: domain Description: GIIM Note: maturase Location: 304734-304947 bp Feature: gene Location: 305426-305800 bp Feature: domain Description: GIIM Note: maturase Location: 305429-305636 bp Feature: domain Description: GIIM Note: maturase Location: 305429-305636 bp Feature: gene Location: 305902-306276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305905-306271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305905-306271 bp Feature: gene Location: 306373-306798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306688-306796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306688-306796 bp Feature: gene Location: 307016-307258 bp Feature: gene Location: 307312-309090 bp Feature: domain Description: Tar Location: 307651-308122 bp Feature: domain Description: Tar Location: 307651 -3081 22 bp Feature: domain Description: PRK15048 Location: 308122-309046 bp Feature: domain Description: PRK1 5048 Location: 3081 22-309046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArsD (pfam06953), RVT-GII, GIIM (pfam08388), Tar (COG0840), PRK15048 (methyl-accepting chemotaxis protein II; Provisional)

Seq: QVEX01000003.1 [Clostridium] aldenense strain AF19-9LB AF19-9LB.Scaf3, whole genome shotgun sequence (380330 bp)
Overview 1 RT 1: 297919-302239 bp Neighborhood of RT #1 [297919, 302265] AcrR DltE RVT-Retrons AIM24 Cons_hypoth95 Feature: gene Location: 297919-298503 bp Feature: domain Description: AcrR Location: 297934-298303 bp Feature: domain Description: AcrR Location: 2 97934-2 98303 bp Feature: gene Location: 298667-299476 bp Feature: domain Description: DltE Location: 298700-299453 bp Feature: domain Description: DltE Location: 2 98700-2 99453 bp Feature: gene Location: 299799-300836 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 300006-300555 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 300006-300555 bp Feature: gene Location: 300892-301569 bp Feature: domain Description: AIM24 Location: 300895-301558 bp Feature: domain Description: AIM2 4 Location: 300895-301558 bp Feature: gene Location: 301708-302265 bp Feature: domain Description: Cons_hypoth95 Location: 301711-302239 bp Feature: domain Description: Cons_hypoth95 Location: 301711-302 2 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), DltE (COG3967), RVT-Retrons, AIM24 (pfam01987), Cons_hypoth95 (pfam03602)