myRT

myRT report for GCA_003434135.1_ASM343413v1

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Seq: QVFB01000025.1 Faecalibacterium prausnitzii strain AM37-13AC AM37-13AC.Scaf25, whole genome shotgun sequence (33843 bp)
Overview 1 RT 1: 13259-24014 bp Neighborhood of RT #1 [13259, 24028] MobC COG4646 KOG0390 RVT-GII HNHc MutS_I YtxK COG4646 Feature: gene Location: 13259-13591 bp Feature: domain Description: MobC Location: 13454-13553 bp Feature: domain Description: MobC Location: 1 3454-1 3553 bp Feature: gene Location: 13588-15528 bp Feature: domain Description: COG4646 Location: 13591-14152 bp Feature: domain Description: COG4646 Location: 1 3591 -1 41 52 bp Feature: domain Description: KOG0390 Location: 14425-14680 bp Feature: domain Description: KOG0390 Location: 1 4425-1 4680 bp Feature: gene Location: 15755-17671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16079-16793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6079-1 6793 bp Feature: domain Description: HNHc Note: nucleases Location: 17423-17594 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7423-1 7594 bp Feature: gene Location: 17701-18063 bp Feature: gene Location: 18371-24028 bp Feature: domain Description: MutS_I Location: 20294-20537 bp Feature: domain Description: MutS_I Location: 20294-20537 bp Feature: domain Description: YtxK Location: 21185-21950 bp Feature: domain Description: YtxK Location: 21 1 85-21 950 bp Feature: domain Description: COG4646 Location: 21995-24014 bp Feature: domain Description: COG4646 Location: 21 995-2401 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT-GII, HNHc (smart00507), MutS_I (pfam01624), YtxK (COG0827)

Seq: QVFB01000040.1 Faecalibacterium prausnitzii strain AM37-13AC AM37-13AC.Scaf40, whole genome shotgun sequence (2318 bp)
Overview 1 RT 1: 89-1981 bp Neighborhood of RT #1 [89, 1981] RVT_N RVT-GII GIIM Feature: gene Location: 89-1771 bp Feature: RT Description: RVT_N Location: 167-410 bp Feature: RT Description: RVT_N Location: 167-410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1118 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1406 bp Feature: gene Location: 1850-1981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)