myRT

myRT report for GCA_003434225.1_ASM343422v1

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Seq: QVFL01000024.1 Absiella sp. AM29-15 AM29-15.Scaf24, whole genome shotgun sequence (51237 bp)
Overview 1 RT 1: 11176-17814 bp Neighborhood of RT #1 [11176, 18041] Resolvase Recombinase RVT-UG8 RVT-UG3 AlbA_2 Feature: gene Location: 11176-11841 bp Feature: gene Location: 11898-12821 bp Feature: domain Description: Resolvase Location: 11961-12399 bp Feature: domain Description: Resolvase Location: 1 1 961 -1 2399 bp Feature: domain Description: Recombinase Location: 12468-12753 bp Feature: domain Description: Recombinase Location: 1 2468-1 2753 bp Feature: gene Location: 13193-15211 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 13721-14162 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 3721 -1 41 62 bp Feature: gene Location: 15408-16775 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 15720-16215 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 5720-1 621 5 bp Feature: gene Location: 16899-17348 bp Feature: gene Location: 17370-18041 bp Feature: domain Description: AlbA_2 Location: 17421-17814 bp Feature: domain Description: AlbA_2 Location: 1 7421 -1 781 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), RVT-UG8, RVT-UG3, AlbA_2 (pfam04326)

Seq: QVFL01000044.1 Absiella sp. AM29-15 AM29-15.Scaf44, whole genome shotgun sequence (2317 bp)
Overview 1 RT 1: 89-1397 bp Neighborhood of RT #1 [89, 1762] RVT_N RVT-GII GIIM Feature: gene Location: 89-1762 bp Feature: domain Description: RVT_N Location: 161-404 bp Feature: domain Description: RVT_N Location: 161-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1109 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1397 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)