myRT

myRT report for GCA_003434525.1_ASM343452v1

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Seq: QVGF01000016.1 Lachnospiraceae bacterium AM25-22 AM25-22.Scaf16, whole genome shotgun sequence (59595 bp)
Overview 1 RT 1: 52406-58169 bp Neighborhood of RT #1 [52406, 58174] PerM TatD_DNAse RVT-Retrons AcrR PRK05402 Feature: gene Location: 52406-53545 bp Feature: domain Description: PerM Location: 52472-53525 bp Feature: domain Description: PerM Location: 52472-53525 bp Feature: gene Location: 53535-54299 bp Feature: domain Description: TatD_DNAse Location: 53541-54294 bp Feature: domain Description: TatD_DNAse Location: 53541 -54294 bp Feature: gene Location: 54383-55351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54545-55103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54545-551 03 bp Feature: gene Location: 55622-56254 bp Feature: domain Description: AcrR Location: 55658-56075 bp Feature: domain Description: AcrR Location: 55658-56075 bp Feature: gene Location: 56270-58174 bp Feature: domain Description: PRK05402 Location: 56288-58169 bp Feature: domain Description: PRK05402 Location: 56288-581 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), TatD_DNAse (cd01310), RVT-Retrons, AcrR (COG1309), PRK05402 (1,4-alpha-glucan branching protein GlgB)

Seq: QVGF01000047.1 Lachnospiraceae bacterium AM25-22 AM25-22.Scaf47, whole genome shotgun sequence (2476 bp)
Overview 1 RT 1: 2-1951 bp Neighborhood of RT #1 [2, 1951] RVT-GII Feature: gene Location: 2-130 bp Feature: gene Location: 134-1234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140-338 bp Feature: gene Location: 1529-1951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII