myRT

myRT report for GCA_003434565.1_ASM343456v1

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Seq: QVGI01000016.1 Lachnospiraceae bacterium AM25-11LB AM25-11LB.Scaf16, whole genome shotgun sequence (57411 bp)
Overview 1 RT 1: 1428-7176 bp Neighborhood of RT #1 [1428, 7196] PRK05402 AcrR RVT-Retrons TatD_DNAse PerM Feature: gene Location: 1428-3332 bp Feature: domain Description: PRK05402 Location: 1446-3327 bp Feature: domain Description: PRK05402 Location: 1 446-3327 bp Feature: gene Location: 3348-3980 bp Feature: domain Description: AcrR Location: 3384-3801 bp Feature: domain Description: AcrR Location: 3384-3801 bp Feature: gene Location: 4251-5219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4413-4971 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 441 3-4971 bp Feature: gene Location: 5303-6067 bp Feature: domain Description: TatD_DNAse Location: 5309-6062 bp Feature: domain Description: TatD_DNAse Location: 5309-6062 bp Feature: gene Location: 6057-7196 bp Feature: domain Description: PerM Location: 6123-7176 bp Feature: domain Description: PerM Location: 61 23-71 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05402 (1,4-alpha-glucan branching protein GlgB), AcrR (COG1309), RVT-Retrons, TatD_DNAse (cd01310), PerM (COG0628)

Seq: QVGI01000044.1 Lachnospiraceae bacterium AM25-11LB AM25-11LB.Scaf44, whole genome shotgun sequence (2413 bp)
Overview 1 RT 1: 2-1208 bp Neighborhood of RT #1 [2, 2041] RVT-GII Feature: gene Location: 2-130 bp Feature: gene Location: 134-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-12 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII