myRT

myRT report for GCA_003434625.1_ASM343462v1

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Seq: QTLI01000001.1 Parabacteroides sp. AM17-47 AM17-47.Scaf1, whole genome shotgun sequence (292121 bp)
Overview 1 RT 1: 189025-196657 bp Neighborhood of RT #1 [189025, 196657] RVT-DGRs Feature: gene Location: 189025-190497 bp Feature: gene Location: 190676-190921 bp Feature: gene Location: 190988-192502 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 191195-191942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 91 1 95-1 91 942 bp Feature: gene Location: 192560-192973 bp Feature: gene Location: 192986-196657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QTLI01000040.1 Parabacteroides sp. AM17-47 AM17-47.Scaf40, whole genome shotgun sequence (20287 bp)
Overview 1 RT 1: 1-6902 bp Neighborhood of RT #1 [1, 6967] TetM_like RVT_N RVT-GII GIIM Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 1-756 bp Feature: domain Description: TetM_like Location: 64-757 bp Feature: domain Description: TetM_like Location: 64-757 bp Feature: gene Location: 1428-2741 bp Feature: gene Location: 2695-4362 bp Feature: RT Description: RVT_N Location: 2749-2992 bp Feature: RT Description: RVT_N Location: 2 749-2 992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3685 bp Feature: domain Description: GIIM Note: maturase Location: 3739-3970 bp Feature: domain Description: GIIM Note: maturase Location: 3739-3970 bp Feature: gene Location: 5022-5435 bp Feature: gene Location: 5747-6967 bp Feature: domain Description: Phage_int_SAM_5 Location: 6086-6374 bp Feature: domain Description: Phage_int_SAM_5 Location: 6086-6374 bp Feature: domain Description: INTN1_C_like Location: 6431-6902 bp Feature: domain Description: INTN1_C_like Location: 6431-6902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetM_like (cd04168), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)