myRT

myRT report for GCA_003435895.1_ASM343589v1

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Seq: QTUT01000018.1 Bacteroides sp. AM16-15 AM16-15.Scaf18, whole genome shotgun sequence (96974 bp)
Overview 1 RT 1: 90136-94123 bp Neighborhood of RT #1 [90136, 94143] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Feature: gene Location: 90136-90717 bp Feature: domain Description: TraO Location: 90214-90712 bp Feature: domain Description: TraO Location: 9021 4-9071 2 bp Feature: gene Location: 90720-91427 bp Feature: domain Description: Bac_Flav_CT_N Location: 90846-91407 bp Feature: domain Description: Bac_Flav_CT_N Location: 90846-91 407 bp Feature: gene Location: 91417-93228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91681-92503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 681 -92503 bp Feature: domain Description: Intron_maturas2 Location: 92572-92881 bp Feature: domain Description: Intron_maturas2 Location: 92572-92881 bp Feature: gene Location: 93263-93598 bp Feature: gene Location: 93769-94143 bp Feature: domain Description: Bac_Flav_CT_N Location: 93772-94123 bp Feature: domain Description: Bac_Flav_CT_N Location: 93772-941 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348)

Seq: QTUT01000031.1 Bacteroides sp. AM16-15 AM16-15.Scaf31, whole genome shotgun sequence (24371 bp)
Overview 1 RT 1: 18606-23916 bp Neighborhood of RT #1 [18606, 23984] TraO RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 18606-19163 bp Feature: domain Description: TraO Location: 18684-19158 bp Feature: domain Description: TraO Location: 18684-19158 bp Feature: gene Location: 19172-20065 bp Feature: gene Location: 20802-22610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21066-21888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1066-2 1888 bp Feature: domain Description: Intron_maturas2 Location: 21966-22269 bp Feature: domain Description: Intron_maturas2 Location: 2 1966-2 2 2 69 bp Feature: gene Location: 22600-23460 bp Feature: domain Description: Toprim_2 Location: 23137-23392 bp Feature: domain Description: Toprim_2 Location: 2 3137-2 3392 bp Feature: gene Location: 23466-23984 bp Feature: domain Description: DUF3872 Location: 23529-23916 bp Feature: domain Description: DUF3872 Location: 2 352 9-2 3916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF3872 (pfam12988)

Seq: QTUT01000005.1 Bacteroides sp. AM16-15 AM16-15.Scaf5, whole genome shotgun sequence (170149 bp)
Overview 1 RT 1: 131947-136231 bp Neighborhood of RT #1 [131947, 136437] RVT-Retrons HTH_17 DUF3987 Feature: gene Location: 131947-132135 bp Feature: gene Location: 132190-133044 bp Feature: gene Location: 133131-133979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 133293-133815 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 3 293 -13 3 815 bp Feature: gene Location: 134684-135049 bp Feature: domain Description: HTH_17 Location: 134819-134957 bp Feature: domain Description: HTH_17 Location: 13 4819-13 4957 bp Feature: gene Location: 135061-136437 bp Feature: domain Description: DUF3987 Location: 135211-136231 bp Feature: domain Description: DUF3 987 Location: 13 5211-13 623 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_17 (pfam12728), DUF3987 (pfam13148)

Seq: QTUT01000061.1 Bacteroides sp. AM16-15 AM16-15.Scaf61, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 126-1921 bp Neighborhood of RT #1 [126, 1921] RVT-GII Feature: gene Location: 126-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564-1227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564 -1227 bp Feature: gene Location: 1655-1921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII