myRT

myRT report for GCA_003436935.1_ASM343693v1

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Seq: QSRG01000001.1 Bacteroides fragilis strain TF09-1 TF09-1.Scaf1, whole genome shotgun sequence (938005 bp)
Overview 1 RT 1: 101723-110681 bp Neighborhood of RT #1 [101723, 110689] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 101723-103912 bp Feature: domain Description: GlnA3 Location: 101798-103910 bp Feature: domain Description: GlnA3 Location: 1 01 798-1 0391 0 bp Feature: gene Location: 104152-106371 bp Feature: gene Location: 106578-107690 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 106893-107442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 06893-1 07442 bp Feature: gene Location: 107832-109625 bp Feature: domain Description: rpsA Location: 107910-109518 bp Feature: domain Description: rpsA Location: 1 0791 0-1 0951 8 bp Feature: gene Location: 109775-110689 bp Feature: domain Description: RNase_Z Location: 109790-110681 bp Feature: domain Description: RNase_Z Location: 1 09790-1 1 0681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: QSRG01000016.1 Bacteroides fragilis strain TF09-1 TF09-1.Scaf16, whole genome shotgun sequence (59528 bp)
Overview 1 RT 1: 30020-31442 bp Neighborhood of RT #1 [30020, 31442] HTH_28 RVT-GII Feature: gene Location: 30020-30154 bp Feature: gene Location: 30229-30519 bp Feature: domain Description: HTH_28 Location: 30253-30400 bp Feature: domain Description: HTH_2 8 Location: 302 53-30400 bp Feature: gene Location: 30640-30837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30643-30835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30643-30835 bp Feature: gene Location: 30867-31076 bp Feature: gene Location: 31080-31442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-GII

Seq: QSRG01000009.1 Bacteroides fragilis strain TF09-1 TF09-1.Scaf9, whole genome shotgun sequence (210545 bp)
Overview 1 RT 1: 54322-57438 bp Neighborhood of RT #1 [54322, 57438] RVT-UG27 Feature: gene Location: 54322-54483 bp Feature: gene Location: 54522-54779 bp Feature: gene Location: 54829-56094 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 55018-55654 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 55018-55654 bp Feature: gene Location: 56112-56738 bp Feature: gene Location: 56782-57438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27