myRT

myRT report for GCA_003438305.1_ASM343830v1

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Seq: QSTW01000001.1 Bacteroides plebeius strain OM06-2 OM06-2.Scaf1, whole genome shotgun sequence (489688 bp)
Overview 1 RT 1: 298760-302139 bp Neighborhood of RT #1 [298760, 302139] RVT-DGRs Feature: gene Location: 298760-300079 bp Feature: gene Location: 300109-300312 bp Feature: gene Location: 300596-301411 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 300929-301253 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 300929-301 253 bp Feature: gene Location: 301377-301607 bp Feature: gene Location: 301555-302139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QSTW01000019.1 Bacteroides plebeius strain OM06-2 OM06-2.Scaf19, whole genome shotgun sequence (76367 bp)
Overview 1 RT 1: 24370-28454 bp Neighborhood of RT #1 [24370, 28507] TDP2 RVT_N RVT-GII GIIM COG3177 Feature: gene Location: 24370-25401 bp Feature: domain Description: TDP2 Location: 24445-25387 bp Feature: domain Description: TDP2 Location: 2 4445-2 5387 bp Feature: gene Location: 25717-26034 bp Feature: gene Location: 26108-27763 bp Feature: domain Description: RVT_N Location: 26162-26405 bp Feature: domain Description: RVT_N Location: 2 6162 -2 6405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26450-27095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6450-2 7095 bp Feature: domain Description: GIIM Note: maturase Location: 27146-27380 bp Feature: domain Description: GIIM Note: maturase Location: 2 7146-2 7380 bp Feature: gene Location: 27760-27906 bp Feature: gene Location: 28307-28507 bp Feature: domain Description: COG3177 Location: 28325-28454 bp Feature: domain Description: COG3177 Location: 2 832 5-2 8454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TDP2 (cd09080), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3177 (Fic family protein )

Seq: QSTW01000003.1 Bacteroides plebeius strain OM06-2 OM06-2.Scaf3, whole genome shotgun sequence (234765 bp)
Overview 1 RT 1: 157705-160913 bp Neighborhood of RT #1 [157705, 160913] RVT-UG27 Feature: gene Location: 157705-157983 bp Feature: gene Location: 158013-158279 bp Feature: gene Location: 158329-159591 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 158521-159157 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 158521-159157 bp Feature: gene Location: 159584-160252 bp Feature: gene Location: 160266-160913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: QSTW01000053.1 Bacteroides plebeius strain OM06-2 OM06-2.Scaf53, whole genome shotgun sequence (1927 bp)
Overview 1 RT 1: 84-1348 bp Neighborhood of RT #1 [84, 1348] RVT-GII GIIM Feature: gene Location: 84-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-891 bp Feature: domain Description: GIIM Note: maturase Location: 993-1206 bp Feature: domain Description: GIIM Note: maturase Location: 993-1206 bp Feature: gene Location: 1067-1348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)