myRT

myRT report for GCA_003438715.1_ASM343871v1

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Seq: QSTP01000002.1 [Eubacterium] rectale strain OM07-13 OM07-13.Scaf2, whole genome shotgun sequence (206703 bp)
Overview 1 RT 1: 165524-169909 bp Neighborhood of RT #1 [165524, 169911] FlgJ Phage_holin_4_1 RVT-DGRs Avd_like PHA00653 Feature: gene Location: 165524-166468 bp Feature: domain Description: FlgJ Location: 165542-166013 bp Feature: domain Description: FlgJ Location: 1 65542-1 6601 3 bp Feature: gene Location: 166472-166900 bp Feature: domain Description: Phage_holin_4_1 Location: 166526-166853 bp Feature: domain Description: Phage_holin_4_1 Location: 1 66526-1 66853 bp Feature: gene Location: 166972-168012 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 167182-167797 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 671 82-1 67797 bp Feature: gene Location: 168368-168757 bp Feature: domain Description: Avd_like Location: 168428-168731 bp Feature: domain Description: Avd_like Location: 1 68428-1 68731 bp Feature: gene Location: 168817-169911 bp Feature: domain Description: PHA00653 Location: 168910-169909 bp Feature: domain Description: PHA00653 Location: 1 6891 0-1 69909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgJ (COG1705), Phage_holin_4_1 (pfam05105), RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)

Seq: QSTP01000028.1 [Eubacterium] rectale strain OM07-13 OM07-13.Scaf28, whole genome shotgun sequence (48587 bp)
Overview 1 RT 1: 33899-41941 bp Neighborhood of RT #1 [33899, 41941] Csx1_III-U Cas2 RVT-UNC cas1_HMARI RVT-CRISPR RVT-GII PRK06242 Feature: gene Location: 33899-35422 bp Feature: domain Description: Csx1_III-U Location: 33998-34889 bp Feature: domain Description: Csx1_III-U Location: 33998-34889 bp Feature: gene Location: 35871-36038 bp Feature: domain Description: Cas2 Location: 35889-36018 bp Feature: domain Description: Cas2 Location: 35889-36018 bp Feature: gene Location: 36010-36474 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 36025-36196 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3602 5-36196 bp Feature: domain Description: cas1_HMARI Location: 36304-36466 bp Feature: domain Description: cas1_HMARI Location: 36304-36466 bp Feature: gene Location: 36488-37105 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 36701-37100 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 36701-37100 bp Feature: gene Location: 37401-37589 bp Feature: gene Location: 38022-38381 bp Feature: gene Location: 38667-39062 bp Feature: gene Location: 39078-39440 bp Feature: gene Location: 39752-39952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39758-39908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39758-39908 bp Feature: gene Location: 41196-41372 bp Feature: domain Description: PRK06242 Location: 41202-41352 bp Feature: domain Description: PRK062 42 Location: 412 02 -41352 bp Feature: gene Location: 41720-41941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx1_III-U (cl21570), Cas2 (COG3512), RVT-GII/RVT-UG7/RVT-UG21/RVT-UG19(RVT-UNC), cas1_HMARI (TIGR03641), RVT-CRISPR, RVT-GII, PRK06242 (flavodoxin; Provisional)

Seq: QSTP01000058.1 [Eubacterium] rectale strain OM07-13 OM07-13.Scaf58, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 93-1686 bp Neighborhood of RT #1 [93, 1686] RVT-GII Feature: gene Location: 93-1388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 48-103 8 bp Feature: gene Location: 1441-1686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QSTP01000009.1 [Eubacterium] rectale strain OM07-13 OM07-13.Scaf9, whole genome shotgun sequence (124981 bp)
Overview 1 RT 1: 96850-102039 bp Neighborhood of RT #1 [96850, 102047] RVT-GII GIIM PBP2_OppA PBP2_OppA Feature: gene Location: 96850-97422 bp Feature: gene Location: 97456-98229 bp Feature: gene Location: 98402-99796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98720-99344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98720-9934 4 bp Feature: domain Description: GIIM Note: maturase Location: 99401-99623 bp Feature: domain Description: GIIM Note: maturase Location: 994 01-99623 bp Feature: gene Location: 99906-100214 bp Feature: gene Location: 100350-102047 bp Feature: domain Description: PBP2_OppA Location: 100479-100692 bp Feature: domain Description: PBP2_OppA Location: 1004 79-100692 bp Feature: domain Description: PBP2_OppA Location: 100731-102039 bp Feature: domain Description: PBP2_OppA Location: 100731-102039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PBP2_OppA (cd08504)