myRT

myRT report for GCA_003438775.1_ASM343877v1

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Seq: QSTV01000001.1 Bacteroides fragilis strain OM06-30AC OM06-30AC.Scaf1, whole genome shotgun sequence (884988 bp)
Overview 1 RT 1: 760620-765330 bp Neighborhood of RT #1 [760620, 765330] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 760620-761030 bp Feature: domain Description: Cas_Cmr5 Location: 760668-760914 bp Feature: domain Description: Cas_Cmr5 Location: 760668-76091 4 bp Feature: gene Location: 761033-761977 bp Feature: domain Description: Cmr6_III-B Location: 761189-761966 bp Feature: domain Description: Cmr6_III-B Location: 761 1 89-761 966 bp Feature: gene Location: 761997-764267 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 762204-762810 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 762204-76281 0 bp Feature: domain Description: Cas1_I-II-III Location: 763269-764226 bp Feature: domain Description: Cas1 _I-II-III Location: 763269-764226 bp Feature: gene Location: 764261-764551 bp Feature: domain Description: Cas2_I_II_III Location: 764288-764498 bp Feature: domain Description: Cas2_I_II_III Location: 764288-764498 bp Feature: gene Location: 765202-765330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QSTV01000011.1 Bacteroides fragilis strain OM06-30AC OM06-30AC.Scaf11, whole genome shotgun sequence (185233 bp)
Overview 1 RT 1: 119939-121955 bp Neighborhood of RT #1 [119939, 121955] RVT-GII HTH_28 Feature: gene Location: 119939-120301 bp Feature: gene Location: 120305-120514 bp Feature: gene Location: 120544-120741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120547-120739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 0547-12 0739 bp Feature: gene Location: 120862-121152 bp Feature: domain Description: HTH_28 Location: 120886-121033 bp Feature: domain Description: HTH_2 8 Location: 12 0886-12 1033 bp Feature: gene Location: 121581-121955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518)

Seq: QSTV01000012.1 Bacteroides fragilis strain OM06-30AC OM06-30AC.Scaf12, whole genome shotgun sequence (171841 bp)
Overview 1 RT 1: 103035-111993 bp Neighborhood of RT #1 [103035, 112001] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103035-105224 bp Feature: domain Description: GlnA3 Location: 103110-105222 bp Feature: domain Description: GlnA3 Location: 103 110-105222 bp Feature: gene Location: 105464-107683 bp Feature: gene Location: 107890-109002 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108205-108754 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108205-108754 bp Feature: gene Location: 109144-110937 bp Feature: domain Description: rpsA Location: 109222-110830 bp Feature: domain Description: rpsA Location: 109222-11083 0 bp Feature: gene Location: 111087-112001 bp Feature: domain Description: RNase_Z Location: 111102-111993 bp Feature: domain Description: RNase_Z Location: 111102-111993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)