myRT

myRT report for GCA_003438835.1_ASM343883v1

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Seq: QSUA01000037.1 Bacteroides vulgatus strain OM06-14 OM06-14.Scaf37, whole genome shotgun sequence (48587 bp)
Overview 1 RT 1: 10760-18225 bp Neighborhood of RT #1 [10760, 18233] Glyco_hydr_30_2 Glyco_hydro_30C XynC RVT-GII Intron_maturas2 HNHc Glyco_hydr_30_2 SusD SusD Feature: gene Location: 10760-12325 bp Feature: domain Description: Glyco_hydr_30_2 Location: 10835-11921 bp Feature: domain Description: Glyco_hydr_30_2 Location: 1 0835-1 1 921 bp Feature: domain Description: Glyco_hydro_30C Location: 12083-12314 bp Feature: domain Description: Glyco_hydro_30C Location: 1 2083-1 231 4 bp Feature: gene Location: 12338-12808 bp Feature: domain Description: XynC Location: 12494-12803 bp Feature: domain Description: XynC Location: 1 2494-1 2803 bp Feature: gene Location: 12795-14765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13218-14040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 321 8-1 4040 bp Feature: domain Description: Intron_maturas2 Location: 14202-14421 bp Feature: domain Description: Intron_maturas2 Location: 1 4202-1 4421 bp Feature: domain Description: HNHc Note: nucleases Location: 14586-14742 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4586-1 4742 bp Feature: gene Location: 15190-16458 bp Feature: domain Description: Glyco_hydr_30_2 Location: 15310-16360 bp Feature: domain Description: Glyco_hydr_30_2 Location: 1 531 0-1 6360 bp Feature: gene Location: 16575-18233 bp Feature: domain Description: SusD Location: 16695-18003 bp Feature: domain Description: SusD Location: 1 6695-1 8003 bp Feature: domain Description: SusD Location: 18084-18225 bp Feature: domain Description: SusD Location: 1 8084-1 8225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydr_30_2 (pfam14587), Glyco_hydro_30C (pfam17189), XynC (COG5520), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SusD (NF033071)

Seq: QSUA01000067.1 Bacteroides vulgatus strain OM06-14 OM06-14.Scaf67, whole genome shotgun sequence (17893 bp)
Overview 1 RT 1: 14810-17377 bp Neighborhood of RT #1 [14810, 17377] Toprim_2 RVT-GII Intron_maturas2 DUF4134 Feature: gene Location: 14810-15220 bp Feature: domain Description: Toprim_2 Location: 14921-15206 bp Feature: domain Description: Toprim_2 Location: 1492 1-152 06 bp Feature: gene Location: 15349-15720 bp Feature: gene Location: 15692-16615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15701-15893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15701-15893 bp Feature: domain Description: Intron_maturas2 Location: 15962-16274 bp Feature: domain Description: Intron_maturas2 Location: 15962 -162 74 bp Feature: gene Location: 16657-16923 bp Feature: domain Description: DUF4134 Location: 16708-16906 bp Feature: domain Description: DUF4134 Location: 16708-16906 bp Feature: gene Location: 16904-17377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), DUF4134 (pfam13572)