myRT

myRT report for GCA_003438995.1_ASM343899v1

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Seq: QSUN01000012.1 Bacteroides sp. OM05-12 OM05-12.Scaf12, whole genome shotgun sequence (101982 bp)
Overview 1 RT 1: 116-4395 bp 2 RT 2: 22697-29092 bp Neighborhood of RT #1 [116, 4412] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [22697, 29121] DUF5106 Thioredoxin_8 RVT-UG17 BACON Fib_succ_major Mfa2 Feature: gene Location: 116-1924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1 202 bp Feature: domain Description: Intron_maturas2 Location: 1313-1580 bp Feature: domain Description: Intron_maturas2 Location: 1 31 3-1 580 bp Feature: domain Description: HNHc Note: nucleases Location: 1754-1901 bp Feature: domain Description: HNHc Note: nucleases Location: 1 754-1 901 bp Feature: gene Location: 1983-2348 bp Feature: gene Location: 2472-4412 bp Feature: domain Description: Bac_Flav_CT_G Location: 2475-4395 bp Feature: domain Description: Bac_Flav_CT_G Location: 2475-4395 bp Feature: gene Location: 22697-23185 bp Feature: gene Location: 23196-24209 bp Feature: domain Description: DUF5106 Location: 23352-23787 bp Feature: domain Description: DUF51 06 Location: 23352-23787 bp Feature: domain Description: Thioredoxin_8 Location: 23868-24153 bp Feature: domain Description: Thioredoxin_8 Location: 23868-241 53 bp Feature: gene Location: 24221-24733 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24416-24665 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2441 6-24665 bp Feature: gene Location: 25004-28123 bp Feature: domain Description: BACON Location: 26420-26597 bp Feature: domain Description: BACON Location: 26420-26597 bp Feature: domain Description: Fib_succ_major Location: 27299-28118 bp Feature: domain Description: Fib_succ_major Location: 27299-281 1 8 bp Feature: gene Location: 28150-29121 bp Feature: domain Description: Mfa2 Location: 28243-29092 bp Feature: domain Description: Mfa2 Location: 28243-29092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), DUF5106 (pfam17127), Thioredoxin_8 (pfam13905), RVT-UG17, BACON (pfam13004), Fib_succ_major (TIGR02145), Mfa2 (pfam08842)

Seq: QSUN01000025.1 Bacteroides sp. OM05-12 OM05-12.Scaf25, whole genome shotgun sequence (46154 bp)
Overview 1 RT 1: 12200-16412 bp Neighborhood of RT #1 [12200, 16412] RteC HTH_17 RVT-GII Intron_maturas2 Feature: gene Location: 12200-12595 bp Feature: domain Description: RteC Location: 12296-12569 bp Feature: domain Description: RteC Location: 12 2 96-12 569 bp Feature: gene Location: 12725-12982 bp Feature: domain Description: HTH_17 Location: 12851-12971 bp Feature: domain Description: HTH_17 Location: 12 851-12 971 bp Feature: gene Location: 13370-15340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13799-14624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13799-1462 4 bp Feature: domain Description: Intron_maturas2 Location: 14738-15020 bp Feature: domain Description: Intron_maturas2 Location: 14738-1502 0 bp Feature: gene Location: 15378-15542 bp Feature: gene Location: 15828-16412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RteC (pfam09357), HTH_17 (pfam12728), RVT-GII, Intron_maturas2 (pfam01348)

Seq: QSUN01000003.1 Bacteroides sp. OM05-12 OM05-12.Scaf3, whole genome shotgun sequence (384476 bp)
Overview 1 RT 1: 295694-302251 bp Neighborhood of RT #1 [295694, 302251] RVT-UG8 RVT-UG3 Feature: gene Location: 295694-296251 bp Feature: gene Location: 296253-296690 bp Feature: gene Location: 297290-299482 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 297905-298355 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 297905-2983 55 bp Feature: gene Location: 299469-300932 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 299919-300432 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 299919-3 0043 2 bp Feature: gene Location: 300983-301141 bp Feature: gene Location: 301337-302251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: QSUN01000049.1 Bacteroides sp. OM05-12 OM05-12.Scaf49, whole genome shotgun sequence (3036 bp)
Overview 1 RT 1: 104-3025 bp Neighborhood of RT #1 [104, 3033] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 104-1927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1190 bp Feature: domain Description: Intron_maturas2 Location: 1364-1604 bp Feature: domain Description: Intron_maturas2 Location: 1364 -1604 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1889 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1889 bp Feature: gene Location: 2185-2373 bp Feature: gene Location: 2497-3033 bp Feature: domain Description: Bac_Flav_CT_G Location: 2554-3025 bp Feature: domain Description: Bac_Flav_CT_G Location: 2554 -3025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)