myRT

myRT report for GCA_003439005.1_ASM343900v1

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Seq: QSUP01000021.1 Parabacteroides merdae strain OM05-11AA OM05-11AA.Scaf21, whole genome shotgun sequence (67946 bp)
Overview 1 RT 1: 4084-10178 bp Neighborhood of RT #1 [4084, 10178] COG1373 RVT-UG5 Feature: gene Location: 4084-4278 bp Feature: gene Location: 4813-6171 bp Feature: domain Description: COG1373 Location: 4852-6121 bp Feature: domain Description: COG1 373 Location: 4852-61 21 bp Feature: gene Location: 6202-9087 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6667-7117 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6667-71 1 7 bp Feature: gene Location: 9119-9736 bp Feature: gene Location: 9717-10178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG5

Seq: QSUP01000054.1 Parabacteroides merdae strain OM05-11AA OM05-11AA.Scaf54, whole genome shotgun sequence (2495 bp)
Overview 1 RT 1: 114-1581 bp Neighborhood of RT #1 [114, 1922] RVT-GII Intron_maturas2 Feature: gene Location: 114-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-12 00 bp Feature: domain Description: Intron_maturas2 Location: 1326-1581 bp Feature: domain Description: Intron_maturas2 Location: 132 6-1581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: QSUP01000055.1 Parabacteroides merdae strain OM05-11AA OM05-11AA.Scaf55, whole genome shotgun sequence (2470 bp)
Overview 1 RT 1: 114-2083 bp Neighborhood of RT #1 [114, 2083] RVT_N RVT-GII GIIM Feature: gene Location: 114-1787 bp Feature: domain Description: RVT_N Location: 168-411 bp Feature: domain Description: RVT_N Location: 168-411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-1104 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1389 bp Feature: domain Description: GIIM Note: maturase Location: 1158-13 89 bp Feature: gene Location: 1769-2083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)