myRT

myRT report for GCA_003439285.1_ASM343928v1

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Seq: QSVD01000001.1 Bacteroides fragilis strain OM02-9 OM02-9.Scaf1, whole genome shotgun sequence (1041720 bp)
Overview 1 RT 1: 139496-144470 bp Neighborhood of RT #1 [139496, 144586] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 139496-139750 bp Feature: gene Location: 140655-140945 bp Feature: domain Description: Cas2_I_II_III Location: 140682-140892 bp Feature: domain Description: Cas2_I_II_III Location: 1 40682-1 40892 bp Feature: gene Location: 140939-143209 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 141146-141752 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 41 1 46-1 41 752 bp Feature: domain Description: Cas1_I-II-III Location: 142211-143168 bp Feature: domain Description: Cas1 _I-II-III Location: 1 4221 1 -1 431 68 bp Feature: gene Location: 143229-144173 bp Feature: domain Description: Cmr6_III-B Location: 143385-144162 bp Feature: domain Description: Cmr6_III-B Location: 1 43385-1 441 62 bp Feature: gene Location: 144176-144586 bp Feature: domain Description: Cas_Cmr5 Location: 144224-144470 bp Feature: domain Description: Cas_Cmr5 Location: 1 44224-1 44470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: QSVD01000005.1 Bacteroides fragilis strain OM02-9 OM02-9.Scaf5, whole genome shotgun sequence (371234 bp)
Overview 1 RT 1: 104114-113072 bp Neighborhood of RT #1 [104114, 113080] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 104114-106303 bp Feature: domain Description: GlnA3 Location: 104189-106301 bp Feature: domain Description: GlnA3 Location: 104189-106301 bp Feature: gene Location: 106543-108762 bp Feature: gene Location: 108969-110081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109284-109833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1092 84-109833 bp Feature: gene Location: 110223-112016 bp Feature: domain Description: rpsA Location: 110301-111909 bp Feature: domain Description: rpsA Location: 110301-111909 bp Feature: gene Location: 112166-113080 bp Feature: domain Description: RNase_Z Location: 112181-113072 bp Feature: domain Description: RNase_Z Location: 112 181-113072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)