myRT

myRT report for GCA_003439675.1_ASM343967v1

Download annotations/find similar RTs

Seq: QSWE01000004.1 Bacteroides fragilis strain OF05-11AC OF05-11AC.Scaf4, whole genome shotgun sequence (460065 bp)
Overview 1 RT 1: 158120-166387 bp Neighborhood of RT #1 [158120, 166770] RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 158120-158260 bp Feature: gene Location: 158465-159748 bp Feature: gene Location: 159727-161400 bp Feature: RT Description: RVT_N Location: 159781-160024 bp Feature: RT Description: RVT_N Location: 1 59781 -1 60024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160069-160717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 60069-1 6071 7 bp Feature: domain Description: GIIM Note: maturase Location: 160771-161002 bp Feature: domain Description: GIIM Note: maturase Location: 1 60771 -1 61 002 bp Feature: gene Location: 161415-161693 bp Feature: gene Location: 162058-166770 bp Feature: domain Description: N6_Mtase Location: 162619-162973 bp Feature: domain Description: N6_Mtase Location: 1 6261 9-1 62973 bp Feature: domain Description: COG4646 Location: 164317-166387 bp Feature: domain Description: COG4646 Location: 1 6431 7-1 66387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: QSWE01000006.1 Bacteroides fragilis strain OF05-11AC OF05-11AC.Scaf6, whole genome shotgun sequence (386436 bp)
Overview 1 RT 1: 197526-206490 bp Neighborhood of RT #1 [197526, 206492] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 197526-198440 bp Feature: domain Description: RNase_Z Location: 197541-198432 bp Feature: domain Description: RNase_Z Location: 197541-198432 bp Feature: gene Location: 198590-200383 bp Feature: domain Description: rpsA Location: 198668-200276 bp Feature: domain Description: rpsA Location: 198668-2 002 76 bp Feature: gene Location: 200525-201637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 200840-201389 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 00840-2 01389 bp Feature: gene Location: 201844-204063 bp Feature: gene Location: 204303-206492 bp Feature: domain Description: GlnA3 Location: 204375-206490 bp Feature: domain Description: GlnA3 Location: 2 04375-2 06490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)