myRT

myRT report for GCA_003444075.1_ASM344407v1

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Seq: DLVN01000239.1 TPA_asm: Planctomycetaceae bacterium isolate UBA9264 contig_10185, whole genome shotgun sequence (21377 bp)
Overview 1 RT 1: 17761-21099 bp Neighborhood of RT #1 [17761, 21374] Glyco_hydro_127 Laminin_G_3 Glyco_hydro_127 RVT-Retrons Feature: gene Location: 17761-20382 bp Feature: domain Description: Glyco_hydro_127 Location: 17884-18352 bp Feature: domain Description: Glyco_hydro_1 27 Location: 1 7884-1 8352 bp Feature: domain Description: Laminin_G_3 Location: 18418-18862 bp Feature: domain Description: Laminin_G_3 Location: 1 841 8-1 8862 bp Feature: domain Description: Glyco_hydro_127 Location: 19075-20167 bp Feature: domain Description: Glyco_hydro_1 27 Location: 1 9075-201 67 bp Feature: gene Location: 20452-20739 bp Feature: gene Location: 20796-21374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20799-21099 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20799-21 099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_127 (pfam07944), Laminin_G_3 (pfam13385), RVT-Retrons

Seq: DLVN01000025.1 TPA_asm: Planctomycetaceae bacterium isolate UBA9264 contig_16473, whole genome shotgun sequence (47692 bp)
Overview 1 RT 1: 1-3656 bp Neighborhood of RT #1 [1, 3670] RVT-Retrons COG4091 Feature: gene Location: 1-693 bp Feature: gene Location: 699-1637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 822-1359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 2 -1359 bp Feature: gene Location: 1812-2135 bp Feature: gene Location: 2321-3670 bp Feature: domain Description: COG4091 Location: 2324-3656 bp Feature: domain Description: COG4091 Location: 2 32 4-3656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4091 (Predicted homoserine dehydrogenase, contains C-terminal SAF domain ), RVT-Retrons

Seq: DLVN01000421.1 TPA_asm: Planctomycetaceae bacterium isolate UBA9264 contig_36480, whole genome shotgun sequence (10142 bp)
Overview 1 RT 1: 438-6429 bp Neighborhood of RT #1 [438, 6429] Peptidase_S9 PhoD_N MPP_PhoD RVT-CRISPR-like Amidohydro_2 Feature: gene Location: 438-2486 bp Feature: domain Description: Peptidase_S9 Location: 777-1227 bp Feature: domain Description: Peptidase_S9 Location: 777-1227 bp Feature: domain Description: PhoD_N Location: 1284-1518 bp Feature: domain Description: PhoD_N Location: 1284-1518 bp Feature: domain Description: MPP_PhoD Location: 1566-2295 bp Feature: domain Description: MPP_PhoD Location: 1566-2295 bp Feature: gene Location: 2663-3076 bp Feature: gene Location: 3192-4607 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3438-4008 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 43 8-4008 bp Feature: gene Location: 4733-6253 bp Feature: domain Description: Amidohydro_2 Location: 5435-6110 bp Feature: domain Description: Amidohydro_2 Location: 543 5-6110 bp Feature: gene Location: 6184-6429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Peptidase_S9 (pfam00326), PhoD_N (pfam16655), MPP_PhoD (cd07389)